Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01337 ATGGGTGTGGATTACTACAAGATCTTGCAGGTTGATAAGAACGCCAAAGACGATGACTTGAAGAAGGCCTACAGAAAACTTGCTATGAAATGGCACCCAGATAAAAATCCCAACAACAAAAAGGAAGCTGAAGCTAAGTTTAAGCAGATTTCTGAAGCATATGAGGTGCTTAGCGATCCTCAAAAGAAAGCTATTTATGATCAATATGGAGAAGAGGGTCTGAAGGGTCAGGTTCCTCCTCCTGATGCTGGTGGTGCTGGAACTACATACTTTTCCACTGGAGATATGCCCGGATCGTTTCGGTTCAATCCAAGAAATGCAGATGACATTTTTGCAGAATTTTTTGGTTTCTCAAGCCCATTTGGAGGAATGGGTGGAAGGGGTGGTGGAGGTGGCGGGGGCATGAGATCAAGGTTCCCTGGTGGGATGTTCGGTGATGATATGTTTGCATCTTTTGGAGATGGAGCTGTACATATGAGTCAAGGTGCTCCTCGGAAAGCTCCTCCGATTGAGAACAAGTTGCCTTGCACTCTTGAGGAGATATATAGAGGAACTACAAAGAAGATGAAGATCTCTAGAGAAATTGCTGATGCCAGTGGCAAAACCATGCCGGTGGAAGAGATCTTAACCATTAATGTGAAGCCTGGTTGGAAGAAGGGAACAAAGATCACCTTCCCTGAAAAGGGAAATGAACAGCCAAACGTGACGCCGGCTGATCTCGTCTTCATCATCGACGAAAAGCCACACAGTGTCTTCACCCGTGACGGAAATGACCTTGTTGTAACGCAGAAGATTTCCCTTGCAGAGGCCTTAACTGGTTACACAGTGCACCTCACCACCCTGGATGGTAGAAACTTAACCATACCAATCAGCAATGTTATTCATCCCAGTTATGAAGAAGTTGTCCCAAGAGAAGGCATGCCACTTCCAAAAGATCCATCAAAGAAAGGAAACTTGAGGATAAAGTTTAACATCAAGTTTCCAACTAGGCTCAGTGATGAGCAAAAAGCAGGAATCAAGAAATTCTTGGCTGCATAA 1038 0.4461 MGVDYYKILQVDKNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKKAIYDQYGEEGLKGQVPPPDAGGAGTTYFSTGDMPGSFRFNPRNADDIFAEFFGFSSPFGGMGGRGGGGGGGMRSRFPGGMFGDDMFASFGDGAVHMSQGAPRKAPPIENKLPCTLEEIYRGTTKKMKISREIADASGKTMPVEEILTINVKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFTRDGNDLVVTQKISLAEALTGYTVHLTTLDGRNLTIPISNVIHPSYEEVVPREGMPLPKDPSKKGNLRIKFNIKFPTRLSDEQKAGIKKFLAA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01337 345 Gene3D DnaJ domain 3 125 IPR036869 -
Viun11g01337 345 SUPERFAMILY Chaperone J-domain 3 130 IPR036869 -
Viun11g01337 345 CDD DnaJ 4 59 IPR001623 -
Viun11g01337 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 251 337 IPR008971 GO:0006457|GO:0051082
Viun11g01337 345 CDD DnaJ_C 168 331 - -
Viun11g01337 345 FunFam DnaJ subfamily B member 13 3 125 - -
Viun11g01337 345 FunFam DnaJ subfamily B member 13 249 329 - -
Viun11g01337 345 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Viun11g01337 345 FunFam Dnaj homolog subfamily b member 166 247 - -
Viun11g01337 345 PRINTS DnaJ domain signature 62 81 IPR001623 -
Viun11g01337 345 PRINTS DnaJ domain signature 6 24 IPR001623 -
Viun11g01337 345 PRINTS DnaJ domain signature 24 39 IPR001623 -
Viun11g01337 345 PRINTS DnaJ domain signature 42 62 IPR001623 -
Viun11g01337 345 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Viun11g01337 345 Pfam DnaJ C terminal domain 170 328 IPR002939 -
Viun11g01337 345 Gene3D - 169 247 - -
Viun11g01337 345 Gene3D - 249 329 - -
Viun11g01337 345 SMART dnaj_3 3 62 IPR001623 -
Viun11g01337 345 Pfam DnaJ domain 4 67 IPR001623 -
Viun11g01337 345 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 343 - -
Viun11g01337 345 SUPERFAMILY HSP40/DnaJ peptide-binding domain 164 259 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01337 Viun-Chr11 29258607 29261733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01337 5 69 C2H2 Transcription Factor Family AT1G74250 39.130 6.07e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01337 K09510 - gmx:100797487 591.652