Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01335 ATGTTCGTGTTTTTTCTTTTCTTCCTCTTCCTTCTCTCTCCTCCACGATACTCTCTCTCTCTAACCCAAGACGGCCTTTTCCTCCTCGAGGCGCGCAGCCGCCTCTCCGACCCCCACAACTCACTCTCCTCCTGGCACCCCGCCGCCTCCACCCCCTGCCGGTGGAGGGGCGTCACCTGCAACAATCATTCCGCCGCCGTCATCGCCGTCGATATCTCTTACTCCTTCCTCTCCGGCCCCTTCCCCGCCGCCCTCTGCCGCCTCCCCTCCCTCTCTTCCCTCAACCTCTCCAACAACCTCATCAACTCCACCCTCTCCGCCGTCTCCCTCTGCCGCTCCCTCCTCCATCTCGACCTCTCCCAAAACGCCCTTGTGGGTCCCATCGACTCCCTCGCCGCACTGACCCCCCTCCGCTACCTCGACCTCTCCGCCAACAACCTCACCGGAGAAATTCCCGAGAGCCTCGCCGCCCTACCCCACCTCGAAACGCTCAACCTCGTTAGCAATCTTCTCACAGGTACCATCCCTGCTTCACTCGGTAACCTCACTTCGCTGAAACACCTTCAACTTGCTTACAACTTGTTCGAGCCGGGTCCCATGCCGAGTGAACTCGGGAAACTCGGAAACCTTGAAACGCTTTTTCTCGCTCAGTGCAACCTTCGAGGTCCCATTCCAGACACCTTCAGCAATCTCGGTAACTTGACAAACCTCGACTTGTCTCAGAACAGCATCACCGGTAACATTCCGCAATGGTTCACGCGTTTCACGCGCGTGACCCAAATTGAGCTTTACCAAAATTCGCTCTCCGGGGAGCTACCCAGAGGAATGTCGAAGATGACGAATTTGAAACTATTCGATGCGTCGAGGAACGAGTTGACTGGGACGATTCCGACCGAGTTGTGTGAGTTGCCACTCCAGTCACTAAATTTATTTGAGAACAAACTCGAAGGGTTTTTGCCGGGGGCTATTGCGCGTTCCCCGAACCTCTCTGAACTCAAACTTTTCAGTAACAGACTCGTTGGAACGTTGCCGAGTGATTTGGGGAGTAACTCGCCGCTGAACCATATTGACGTTTCGTTTAACCGGTTTTCCGGCGAAATTCCGGCGAGCATTTGCCGGCAGGGGCAGCTTGAGCAACTAATCTTGATATACAATTCGTTTTCGGGTGAAATTCCCGAGAGTCTTGGGAAATGCAAGAGTTTGATGAGGGTTCGGTTAAGGAACAATAATCTCTCGGGAAGTGTTCCTGAAGGGGTTTGGAGTTTGCCCCGTTTGCAATTGCTCGAGCTTTTGGTAAATTATTTTTCTGGGCACATTTCTAAGGGGATTTCTGGCTCTTCCAGCTTATCGAATTTGTTGCTTTCAAATAACCTGTTTTCTGGGTCGATTCCTGAGGAAATCGGGTTATTGGACAATCTTGTGGAGTTTGCTGCTAGTAATAATAACCTCTCGGGTCAGATTCCGGGGAGTATGGTGAAGTTGAAGCAGTTGGTTAATCTCGATCTTAGTTCTAATCAACTTTCTGGTGATCTTAATTTCGGTGGAATCGGTTACTTGAGCAAGGTCACTGACCTTAATCTGTCACATAATAGGTTGGATGGAAATGTTCCAAGCGAATTAGGAAGCTTTCCTGTGCTTAATTATCTTGATCTTTCTTGGAACAATTTCTCTGGGGAGATTCCATTGCAGTTGCAGAACTTGAGGCTATCTGAGTTGAATTTGTCTTACAACCAGCTTTCTGGGGATATTCCTCCTCTTTACGCCAATGCCAATTACAAAACGAGTTTTATAGGGAATCCTGGCCTCTGTAGTCATCTCCCTGGGCTTTGTAGTTGTTACGGTAGGAATAAGAACTGGAGGCACATGTGGATTTTGTGGTCCATTTTTGTGCTTGCAGGAGTTGTGTTCATTATTGGGGTGGCTTGGTTTTACTTCAGGTACAGGAAGGTGAAGAAATTGCAGAAAGGGTTATGCACTGCGAGTTGGAAGTCGTTTCACAAGCTGCGGTTTAGTGGGTTAGAGGTTGCTAAGTTGCTGAATGAGGCCAATGTGATAGGAAAGGGAGCATCTGGGAAGGTATACAAGGTGGTGCTCAGCAACGGTGAGGTGGTGGCAGTGAAAAAACTGAGCGGAGGAGCCCCAAAAAAAGTGGATGAAAATGGTGGTTCCAGAAAAGATGAATTTGAAGCTGAAGTAGAAGCACTGGGGAGGATCAGGCACAAGAATATAGTGAGGTTGTGGTGTTGCTGCAACAGTGGGAACGACAAGCTTTTGGTGTTTGAATACATGCCAAATGGGAGTTTGGGTGATTTGTTACAGAGCAGCAAGAAGAGCTTGTTGGATTGGCCTACAAGGTGTAAAATTGCTGTTGATGCTGCTGAGGGGCTTTCTTATTTACATCATGATTGTGTCCCACCCATTGTTCACAGGGATGTGAAATCTAACAATATATTGGTTGATGAAGATTTTGTAGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATAGTGACAAAAGCCGGCCATGGGACAGAATCAATGTCTGTTATTGCAGGATCATACGGCTACATTGCACCAGAATACGCGTACACTCTGAGGGTGAATGAGAAGTGTGACATATACAGTTTTGGAGTGGTGATTTTGGAGTTGGTAACTGGGAGACCCCCCATTGATCCAGAGTATGGTGAAAATGATTTGGTGAAATGGGTTTCCTCTGCATTGGAACATGAAGAAGTGGATGATGTAGTTGATCCTACATTGGACTACAAATTCAGGGAAGAAATAAGCAAGGTGTTGAGTGTGGGTATGCAGTGCACCAGCTCCAACCCGATAACTCGCCCCACAATGAGAAACGTGGTTAAAATGCTTCGTGAGGTAACATCAGTGCCCAAATGCGCAAGTGTAAACCATGGAAATGACCATTGCTACAGTGAAGGCACTTCTCGTTGTATCAGTGCAGTGTAG 2961 0.4829 MFVFFLFFLFLLSPPRYSLSLTQDGLFLLEARSRLSDPHNSLSSWHPAASTPCRWRGVTCNNHSAAVIAVDISYSFLSGPFPAALCRLPSLSSLNLSNNLINSTLSAVSLCRSLLHLDLSQNALVGPIDSLAALTPLRYLDLSANNLTGEIPESLAALPHLETLNLVSNLLTGTIPASLGNLTSLKHLQLAYNLFEPGPMPSELGKLGNLETLFLAQCNLRGPIPDTFSNLGNLTNLDLSQNSITGNIPQWFTRFTRVTQIELYQNSLSGELPRGMSKMTNLKLFDASRNELTGTIPTELCELPLQSLNLFENKLEGFLPGAIARSPNLSELKLFSNRLVGTLPSDLGSNSPLNHIDVSFNRFSGEIPASICRQGQLEQLILIYNSFSGEIPESLGKCKSLMRVRLRNNNLSGSVPEGVWSLPRLQLLELLVNYFSGHISKGISGSSSLSNLLLSNNLFSGSIPEEIGLLDNLVEFAASNNNLSGQIPGSMVKLKQLVNLDLSSNQLSGDLNFGGIGYLSKVTDLNLSHNRLDGNVPSELGSFPVLNYLDLSWNNFSGEIPLQLQNLRLSELNLSYNQLSGDIPPLYANANYKTSFIGNPGLCSHLPGLCSCYGRNKNWRHMWILWSIFVLAGVVFIIGVAWFYFRYRKVKKLQKGLCTASWKSFHKLRFSGLEVAKLLNEANVIGKGASGKVYKVVLSNGEVVAVKKLSGGAPKKVDENGGSRKDEFEAEVEALGRIRHKNIVRLWCCCNSGNDKLLVFEYMPNGSLGDLLQSSKKSLLDWPTRCKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILVDEDFVAKVADFGVAKIVTKAGHGTESMSVIAGSYGYIAPEYAYTLRVNEKCDIYSFGVVILELVTGRPPIDPEYGENDLVKWVSSALEHEEVDDVVDPTLDYKFREEISKVLSVGMQCTSSNPITRPTMRNVVKMLREVTSVPKCASVNHGNDHCYSEGTSRCISAV 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01335 986 SUPERFAMILY L domain-like 33 367 - -
Viun11g01335 986 ProSiteProfiles Leucine-rich repeat profile. 568 590 IPR001611 GO:0005515
Viun11g01335 986 SUPERFAMILY RNI-like 262 587 - -
Viun11g01335 986 FunFam Receptor-like protein kinase HSL1 304 612 - -
Viun11g01335 986 Gene3D Transferase(Phosphotransferase) domain 1 763 975 - -
Viun11g01335 986 SMART serkin_6 679 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01335 986 Gene3D Ribonuclease Inhibitor 276 612 IPR032675 -
Viun11g01335 986 SMART LRR_typ_2 134 157 IPR003591 -
Viun11g01335 986 SMART LRR_typ_2 519 543 IPR003591 -
Viun11g01335 986 SMART LRR_typ_2 231 254 IPR003591 -
Viun11g01335 986 SMART LRR_typ_2 88 112 IPR003591 -
Viun11g01335 986 SMART LRR_typ_2 207 230 IPR003591 -
Viun11g01335 986 SMART LRR_typ_2 158 182 IPR003591 -
Viun11g01335 986 SMART LRR_typ_2 279 303 IPR003591 -
Viun11g01335 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Viun11g01335 986 Pfam Leucine rich repeat 209 268 IPR001611 GO:0005515
Viun11g01335 986 Pfam Leucine rich repeat 137 194 IPR001611 GO:0005515
Viun11g01335 986 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 206 299 - -
Viun11g01335 986 Gene3D Ribonuclease Inhibitor 170 275 IPR032675 -
Viun11g01335 986 PRINTS Leucine-rich repeat signature 137 150 - -
Viun11g01335 986 PRINTS Leucine-rich repeat signature 494 507 - -
Viun11g01335 986 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 763 971 - -
Viun11g01335 986 Pfam Protein kinase domain 681 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01335 986 SUPERFAMILY Protein kinase-like (PK-like) 679 955 IPR011009 -
Viun11g01335 986 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 21 182 - -
Viun11g01335 986 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 35 195 - -
Viun11g01335 986 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Viun11g01335 986 Gene3D Ribonuclease Inhibitor 20 169 IPR032675 -
Viun11g01335 986 ProSiteProfiles Protein kinase domain profile. 679 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01335 986 Gene3D Phosphorylase Kinase; domain 1 646 762 - -
Viun11g01335 986 ProSitePatterns Protein kinases ATP-binding region signature. 685 716 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01335 Viun-Chr11 29227794 29231193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01335 19 958 Receptor kinase-like Gene Family AT1G28440 57.203 0.0 1057
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun11g01335 Pkinase 7.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01335 - - gmx:100796415 1426.38