Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01332 ATGACTCAGTGCAGTGACCCTAACGTCATAGAGGAGGGACGAAAGGATAGCTTAATTAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGAACAGGGAGGTGGAATTCATGATTTACCAGGACTTCCTGCTGGTGTGAAGTTTGATCCTACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGATCTGATATTCACAAGCTTCATCCTCTGATTGATGAGTTCATTCCCACTCTTGAAGGCGAGAATGGAATCTGCTATACTCACCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGTCTGATTCGGCATTTCTTTCACAGGCCTTCGAAGGCATACACGACAGGAACAAGGAAAAGAAGAAAGGTGCACTCAGACGAAGATGGCAGCGAGACACGTTGGCACAAAACAGGAAAAACCAGACCAGTCTACAACAGTGCCAAGTTGAAAGGGTACAAGAAAATCCTCGTACTTTACACAAACTATGGAAAACAAAGAAAGCCGGAGAAAACAAACTGGGTCATGCACCAATACCATCTTGGCAGTGATGAAGAGGAAAAAGAAGGGGAATTAGTTGTGTCTAAAGTTTTCTACCAAACACAGCCTAGACAGTGCAATTCCCTCATCAAAGACTCATCAGTTTCTGAGAAACACATGAATAAGGGTCAAAATGTGCATGAGGTGATCAATAACAGAAGCAAAAGCAACGGTTTTGTTGAGTACTACCATTCAAATTTCATCTCATTTGATCAAAGTGCTCAACACAGACCAAGCACTGCTCAAGCAATTTCCCATTTTCCTGTTCATGAAGGTGCTCCTTTCAACATTCCTTGA 846 0.4243 MTQCSDPNVIEEGRKDSLIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCNSLIKDSSVSEKHMNKGQNVHEVINNRSKSNGFVEYYHSNFISFDQSAQHRPSTAQAISHFPVHEGAPFNIP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01332 281 ProSiteProfiles NAC domain profile. 44 203 IPR003441 GO:0003677|GO:0006355
Viun11g01332 281 MobiDBLite consensus disorder prediction 118 143 - -
Viun11g01332 281 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 17 235 IPR044799 GO:0003700
Viun11g01332 281 MobiDBLite consensus disorder prediction 123 142 - -
Viun11g01332 281 Gene3D NAC domain 53 207 IPR036093 GO:0003677|GO:0006355
Viun11g01332 281 FunFam NAC domain-containing protein 73 53 207 - -
Viun11g01332 281 Pfam No apical meristem (NAM) protein 45 184 IPR003441 GO:0003677|GO:0006355
Viun11g01332 281 SUPERFAMILY NAC domain 39 203 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01332 Viun-Chr11 29140079 29143447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01332 20 220 NAC Transcription Factor Family AT4G28500 78.218 1.36e-117 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun11g01332 NAM 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01332 - - gmx:100797459 533.872