Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01317 ATGGAAACCCAGGGTGGAAATAATGCTTCACAATTGCTTCGAGCTCAAACCCATGTCTGGAACCATATTTTAAAATTCATAAACTCTTTGTCTCTTAAGTGTGCTACTGAGTTGGGCATAGCAGATATCATACACAACTATGGCCAACCTATGCCACTCTCACAACTCATTGCTTCATTACCAATCCACCCTTCCAAGACTTCCTTTATCAGCCGCTTCATGAGAATTCTGACTCATTCTGGTTTCTTCTCTGAACACCATGACACCCCAAATGAGGGTGAAGTGATGTATGTGCTAACTGATGCATCTAAATTACTCCTGAAGGACCATCCCTCCAGCATGAAATCTTTGTTACAACTCATAGTTGATCCAGTTTCCATTAATCCATGGTTTCAATTCTCTACTGAGAACATAGAATATGTTGGAGGAGATATGTTTCAAGCAATTCCTTCAGCAGATTCCATTATGTTAAAGTTGATAATGCATAACTGGAAGGACGAGGAATGTGTGAAAATACTGAAAAATTGCAAGGAGTCAATAGCAAGCGAGGGAAGGGTTATTATTATCGACATGGTGATGGAGAACAAGAAGGAAGATCATGAATTAACTGAAATGCAGCTTTTCCTTGATATGCAGATGATGATGCTGTTCAGTGCAAAAGAAAGAAATGAGAAAGAGTGGGCCAACCTAATTTTCTCTGCTGGCTTCAGTAACTACAACATTACTCCCATTGGTTTATTTTCTATCATTGAGGTTTATCCATAG 765 0.3922 METQGGNNASQLLRAQTHVWNHILKFINSLSLKCATELGIADIIHNYGQPMPLSQLIASLPIHPSKTSFISRFMRILTHSGFFSEHHDTPNEGEVMYVLTDASKLLLKDHPSSMKSLLQLIVDPVSINPWFQFSTENIEYVGGDMFQAIPSADSIMLKLIMHNWKDEECVKILKNCKESIASEGRVIIIDMVMENKKEDHELTEMQLFLDMQMMMLFSAKERNEKEWANLIFSAGFSNYNITPIGLFSIIEVYP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01317 254 Gene3D - 2 102 IPR036388 -
Viun11g01317 254 PANTHER O-METHYLTRANSFERASE 13 132 IPR016461 GO:0008168
Viun11g01317 254 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Viun11g01317 254 Pfam O-methyltransferase domain 134 237 IPR001077 GO:0008171
Viun11g01317 254 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 247 IPR029063 -
Viun11g01317 254 Gene3D Vaccinia Virus protein VP39 103 254 IPR029063 -
Viun11g01317 254 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Viun11g01317 254 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Viun11g01317 254 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 254 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01317 Viun-Chr11 28755426 28756843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01317 137 254 Monolignol Biosynthesis Gene Families AT1G51990 43.443 5.71e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01317 - - vun:114168837 504.597