Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01310 ATGGAAACCCAGGGTGGAGATAATGCTTCACAATTGCTTCGAGCTCAAACCCATGTCTGGAACCATATTTTCAAATTCATAAACTCGTTGTCTCTTAAGTGTGCTACTGAGTTGGGCATAGCAGATATCATACACAACTATGGCCAACCTATGCCACTCTCACAACTCATTGCTTCATTACCTATCCACCCTTCCAAGACTTCCTTTATCAGCCGTTTGATGAGAATTTTAACTCATTCCGGTTTCTTCTCTGAACACCATGGCACCCCAAATGAGGGTGAAGTGTTGTATGTGCTAACTGATGCATCTAAATTACTCCTAAAGGACCATCCCTCCAGCATGACATCTTTGTTACAACTCATAGTTGATCCAGTTTATATTAATCCATGGTATCAACTCTCTACTTGGTTCACAAATGAAGACCCTACACCATTTTATACTGAAAATGGGATGACAGTTTGGGATTTTTTTAGGTGTAAGCCTAAATTCAACCACCTTTTCAACGATGCCATGGCCAGTGACAGTAAATGGGTGTCCAGTGTAGTGATTGAGAAGTGTGAAGGAGTGTTGAATGCATCAAAGTCATTGGTCGATGTTGGAGGAGGAACAGGGACAATGGCTAAGGTTATTGCTGAGTCATTCCCACATCTAAAGTGCACTGTATTGGATCTGCCGCATGTCGTTGCTGACTTGCAAGGAACTGAGAACATAGAATATGTTGGAGGAGATATGTTTCAAGCAATTCCCTCAGCAGATTCCATTATGTTAAAGATGATGATGATTCTAACTGGAAAAGAAAGAAATGAGAAAGAGTGGGCCAGCCTAATTTTGTCTGCTGGCTTCAGTAACTACAACATTACTCCCATAGGTTTGTATTCTGTCATTGAGGTTTATCCATAG 900 0.4111 METQGGDNASQLLRAQTHVWNHIFKFINSLSLKCATELGIADIIHNYGQPMPLSQLIASLPIHPSKTSFISRLMRILTHSGFFSEHHGTPNEGEVLYVLTDASKLLLKDHPSSMTSLLQLIVDPVYINPWYQLSTWFTNEDPTPFYTENGMTVWDFFRCKPKFNHLFNDAMASDSKWVSSVVIEKCEGVLNASKSLVDVGGGTGTMAKVIAESFPHLKCTVLDLPHVVADLQGTENIEYVGGDMFQAIPSADSIMLKMMMILTGKERNEKEWASLILSAGFSNYNITPIGLYSVIEVYP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01310 299 PIRSF O-mtase 1 263 IPR016461 GO:0008168
Viun11g01310 299 PIRSF O-mtase 257 299 IPR016461 GO:0008168
Viun11g01310 299 PANTHER O-METHYLTRANSFERASE 13 258 IPR016461 GO:0008168
Viun11g01310 299 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 299 IPR016461 GO:0008168
Viun11g01310 299 Gene3D Vaccinia Virus protein VP39 107 256 IPR029063 -
Viun11g01310 299 Gene3D Vaccinia Virus protein VP39 257 299 IPR029063 -
Viun11g01310 299 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Viun11g01310 299 Pfam O-methyltransferase domain 130 259 IPR001077 GO:0008171
Viun11g01310 299 Gene3D - 2 106 IPR036388 -
Viun11g01310 299 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Viun11g01310 299 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 291 IPR029063 -
Viun11g01310 299 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01310 Viun-Chr11 28364863 28366621 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01310 30 257 Monolignol Biosynthesis Gene Families AT5G54160 32.759 5.84e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01310 - K16040 pvu:PHAVU_008G1678001 408.683