Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01308 ATGGAAACCCAGGGTGAAGTGCATGCTTCAAAATTGCTTCGAGCTCAAACCCATGTTTGGAATCACATTTTCAGATTCATAAGCTCTCTGTCTCTTAAGTGTGGTATTGAGTTGGGCATAGCAGATATCATACACAACTATGGCCAACCTATGCCACTCTCACAACTCATTGCTTCATTACCAATCCACCCTTCCAAGACTTCCTTTATCAGCCGTTTGATGAGAATTCTGACTCATTCTGGTTTCTTCTCTGAACACCATGGCACCCCAAATGAGGGTGAAGTGATGTATGTGCTAACTGATGCATCTACATTACTCCTAAAGGACCATCCCTTTAGTATGAGATGTGTGCTGCAATTAATATTTGATCCAGTTATGATCAATCCATGGTTTCAATTCTCTACCTGGTTCACAAATGAAACCCCTTCACCGTTTCACAGTGAAAATGGTATGGGATGTTGGGATTTTGCTGGGCGTGATCCTAATTTCAATCACCGTTTCAATGATATGATGGCTATGGACAGTCGACTGGTTTCCACTGTGGTGATTGAGAAGTATAAGAGATTGTTGGAGGGAACAGAATCATTGGTTGATGTTGGAGGAGGAACAGGGACTATGGCTAAGGTCATTGTTGACTCCTTCCCACAGCTAAAGTGCATTGTATTTGATCTGCCACATGTTGTAGCAGGCTTGGAAGAAACTCAGAACATAAAATATGTTGGAGGGGACATGTTTGAAGCAATTCCTCATGCTGATTCCATCATGTTGAAGTGGGTATTGCATGACTGGAAGGACGAGGAATGTGTGAAAATACTGAAAAATTGCAAGGAGGCAATGGCCAGCGAGGGAAGGGTTCTTATCATAGATATTGTGATGGAGAATAAGAAGGAAGACCATGAATTAACTGAGACGCAGTTTTTCTTTGATATGCAGATGATGATGATTCTAACTGGAAAAGAAAGAAATGAGAAAGAGTGGGCCAGCCTAATTTTGTCTGCTGGCTTCAGTAACTACAACTGTTTCAAACTAACTGAACTAGAGGTGGGTATTGCATGA 1056 0.4167 METQGEVHASKLLRAQTHVWNHIFRFISSLSLKCGIELGIADIIHNYGQPMPLSQLIASLPIHPSKTSFISRLMRILTHSGFFSEHHGTPNEGEVMYVLTDASTLLLKDHPFSMRCVLQLIFDPVMINPWFQFSTWFTNETPSPFHSENGMGCWDFAGRDPNFNHRFNDMMAMDSRLVSTVVIEKYKRLLEGTESLVDVGGGTGTMAKVIVDSFPQLKCIVFDLPHVVAGLEETQNIKYVGGDMFEAIPHADSIMLKWVLHDWKDEECVKILKNCKEAMASEGRVLIIDIVMENKKEDHELTETQFFFDMQMMMILTGKERNEKEWASLILSAGFSNYNCFKLTELEVGIA 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01308 351 PANTHER O-METHYLTRANSFERASE 13 337 IPR016461 GO:0008168
Viun11g01308 351 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Viun11g01308 351 PIRSF O-mtase 1 351 IPR016461 GO:0008168
Viun11g01308 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 351 IPR016461 GO:0008168
Viun11g01308 351 Gene3D Vaccinia Virus protein VP39 107 350 IPR029063 -
Viun11g01308 351 FunFam O-methyltransferase ZRP4 108 350 - -
Viun11g01308 351 Gene3D - 2 106 IPR036388 -
Viun11g01308 351 Pfam Dimerisation domain 31 78 IPR012967 GO:0046983
Viun11g01308 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 343 IPR029063 -
Viun11g01308 351 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Viun11g01308 351 Pfam O-methyltransferase domain 130 336 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01308 Viun-Chr11 28321405 28323203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01308 30 335 Monolignol Biosynthesis Gene Families AT5G54160 34.084 7.86e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01308 - K16040 gmx:100793263 471.085