Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01304 ATGAGTTTTGGGAACGAAGATCATTCTTCCAAGCTACTCCAAGCTCAAACCCACATATTTAACCAAACTTTTGGTTTCATAAACTCTATGTCCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATACACAACTATGGCCAACCTATGCCACTCTCACAACTCATTGCTTCACTTCCAATTCACCCTTCCAAGGCTTGCTTTGTTTCCCGTTTGATGCAAATATTGGTCCAATCTGGTTTTATCTCTCAAAACAGTGTCACTGATGATGATGATGAAAAGAAAGAAGTGAGTTATGCTTTAACTGATGCATCTGCACTACTCCTTAAGGAGCATCCCTTTAGTATGACATGTTTGCCACAAGTCATACTTGATCCAATTTTGGTGAATCCATGGTTTCAGTTCTCCACTTGGTTCACAAATGATGAGCCCACACCATTTCACGCACATAATGGGATGAGTTTTTGGGACTATGCGAGCCGTGAGCCCAAACTCAATCACCTTTTCAATGATGCCATGACCAATGACACTCGATTGATTTCCAGTGTGATGATTGAGAAGTGCAAGGGAGTGTTGGAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGAACCATGGCTAAGGCCATTGCCAAGTCTTTTCCACACTTGAAGTGTATTGTTTTTGATCTTCCACATGTCGTTCATGGCTTGCAAGGAACGGATAACATCGAATATGTTGGAGGGGACATGTTTCAAGCAATCCCTTCTGCTCATTCCATCATGCTCAAGACAATAATGCACAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCGAAAAGAAAGATAAAGGAAAAGTGATTATCATAGACGTTGTGATAGGAAACGAGAAAGGAGACAGTGAATTGGATCAAACAAAGCTCTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAAGAGAGAAATCAGAAAGATTGGGCCAACTTGTTTTTTTCTGCAGGCTTTAGTCACTATAAGATAACTCCAGTTCTAGGTTTCAAGTCTCTCATAGAGGTTTATCCATAG 1080 0.4083 MSFGNEDHSSKLLQAQTHIFNQTFGFINSMSLKCAIDLCIPDVIHNYGQPMPLSQLIASLPIHPSKACFVSRLMQILVQSGFISQNSVTDDDDEKKEVSYALTDASALLLKEHPFSMTCLPQVILDPILVNPWFQFSTWFTNDEPTPFHAHNGMSFWDYASREPKLNHLFNDAMTNDTRLISSVMIEKCKGVLEGLESLVDVGGGTGTMAKAIAKSFPHLKCIVFDLPHVVHGLQGTDNIEYVGGDMFQAIPSAHSIMLKTIMHNWNDEECLKILKRCKEAIEKKDKGKVIIIDVVIGNEKGDSELDQTKLYYDMEMMVLVTGKERNQKDWANLFFSAGFSHYKITPVLGFKSLIEVYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01304 359 FunFam Coniferyl alcohol 9-O-methyltransferase 2 109 - -
Viun11g01304 359 FunFam O-methyltransferase ZRP4 111 359 - -
Viun11g01304 359 SUPERFAMILY "Winged helix" DNA-binding domain 9 114 IPR036390 -
Viun11g01304 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Viun11g01304 359 Gene3D Vaccinia Virus protein VP39 110 359 IPR029063 -
Viun11g01304 359 Gene3D - 2 109 IPR036388 -
Viun11g01304 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 358 IPR029063 -
Viun11g01304 359 PANTHER O-METHYLTRANSFERASE 12 344 IPR016461 GO:0008168
Viun11g01304 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
Viun11g01304 359 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Viun11g01304 359 Pfam O-methyltransferase domain 133 341 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01304 Viun-Chr11 28096186 28098145 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01304 30 345 Monolignol Biosynthesis Gene Families AT5G54160 33.022 4.13e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01304 - K16040 gmx:100793263 622.854