Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01297 ATGATGAGAGAAAGTTCCAAGGGCAAGTTTGGATCTTCTTCTATTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAAATTCAAGGGATTTTCAGCAATCTTCAGTGTGCAAGAAAAGAGGGCAGGGGTAATGACATTGTGATCTTTGAGGAGCAGATGCATCAGCTGCTCCGCGAGTGGAAGGCGGAACTGGAGTCTCCAGCGACCTCCTTAGCTGATGGAAGCTTTGATTCGTTTACCAGTGAACTTGCCCAACTGTTGCAAGTGATTGAGGAGAAAGATGATGCAACTAGTCCATTAACAAAACCTGGGCCATTGAAGACTGAGCTCCAAACAAGTAACACTAGTGACAACAATTTTCAGTTTTTTCAGGAGAAGCATTTTGATGACAACCAACCTCTAGGTCATAATTTCGAAGGCTCTGCTTCAACTCTGTACAACAATGCTTTTAATAACTCAGATATGGAACAGCTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCAAGTTGGTCACAACTCTGATTTGATTGGTCAGGTGGATTTATATCAGGACCTGGGGCATAACACAGAAATTAAACACTCAGAATCAAATCAATTTAGCATAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCCGAGGATACTGTGCATCATGGAGAAAACATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCATCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCCTGAACTACTGTAGCAGTTGTCATGAGCTGTTGGCAAATAATGAGGGTCTTCCTGGCATGACTCCAATTTTACGACCAGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCGAAGACGCAGGGAAAGGAAGTGGGCATCCCCAGTTGTGAAGGCGCTGCGTCAACTAAATCTCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAGCTGTTAGGGAGTGGCTATTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAAAGATCACTTCCAGATTACAGCGGACGCGGTTGGCATGAATCAAGGAAGCAGGTGATGAAAGAACATGGAGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTGGAATGGCATTTGTACGAGTATGAGATCAACAACCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTTGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCTATCATCTGATGATGGAATATCCATCAAGGGAAAAACAAATGCCAAGTCTGAGAATGATGGATCTCCAGAAAAGTAA 1449 0.4265 MMRESSKGKFGSSSIQSMKEKEKHLVDKIQGIFSNLQCARKEGRGNDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQTSNTSDNNFQFFQEKHFDDNQPLGHNFEGSASTLYNNAFNNSDMEQLDFHPFSLNQDMNHNQVGHNSDLIGQVDLYQDLGHNTEIKHSESNQFSIEGFDCSQFFGAEDTVHHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCLNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGEAVREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLNDLQNKMGQLTAAVLSSDDGISIKGKTNAKSENDGSPEK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01297 482 MobiDBLite consensus disorder prediction 360 390 - -
Viun11g01297 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
Viun11g01297 482 MobiDBLite consensus disorder prediction 369 390 - -
Viun11g01297 482 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01297 Viun-Chr11 27904061 27907782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01297 1 455 VOZ-9 Transcription Factor Family AT1G28520 51.528 4.20e-156 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Viun11g01297 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01297 - - vra:106755121 973.77