Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01286 ATGAATTCCCATTGCTTCTTACGTTTCCCTTTATCATGTTTTCTTCTCTTCGCTTTCGCCCCATGTTGTTTTTCACACCCTTCTCTCCTTGGCGTACACCCATTAGATGAGAAATATTACAGCTCTGAGGTGATCAAGTGCAAGGATGGATCAAAATACTTCACCAGAGACCGTCTTAATGACAATTTCTGTGACTGCCCTGATGGCACTGATGAACCTGGGACTTCAGCTTGCCCTGCCGCAAAGTTTTACTGCAGAAACCTTGGTAGCAAACCACAGTTCATAGTTTCTTCTCATGTTAATGATCATTTTTGTGATTGTTGTGACGGAAGTGATGAACATGATGGAATCATTTGTTGCCCAAACACATGTGTCATGGGTGGAAATGCAGAGTCGAAAATTAGCTTTTGCAAATCAAATAAAAAAGAAGTGAAGTCGGAGGAATCAGTTCATAACGTTACTGGTTTGAAGTTGGTGTTTATTCTACAAATGGTTCTGCTTATTTTTCTGGTATTTCTCTGGAGTCTTCGATGCCGCACCAGATCTAGAAAGAGACTTTCCCATTGA 567 0.4092 MNSHCFLRFPLSCFLLFAFAPCCFSHPSLLGVHPLDEKYYSSEVIKCKDGSKYFTRDRLNDNFCDCPDGTDEPGTSACPAAKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEHDGIICCPNTCVMGGNAESKISFCKSNKKEVKSEESVHNVTGLKLVFILQMVLLIFLVFLWSLRCRTRSRKRLSH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01286 188 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 11 145 IPR039794 -
Viun11g01286 188 Pfam Glucosidase II beta subunit-like 27 145 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01286 Viun-Chr11 27776574 27780536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01286 29 130 Calmodulin-binding Proteins AT5G56360 66.990 2.33e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01286 - - gmx:100783506 318.546