Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01285 ATGGCTCAATTGCCACCAAAAGTTCCAAACATGGCACCCAATTGGCCAGACTTTTCTTCTCCTCACCAAAAGATGCCTTCCCTCAAAACCATGGCACCAAACATCTCAAACCAAAACCCTTCATGGGTGGACGAGTTTCTTGACTTCTCAGCCGCCAGGCGCGGTGCTCACCGGCGGTCGGTCAGTGACTCCATCGCCTTCCTGGAGGCGCCAATGCTCGATCATCACTGCAAAAGCCGCGGGAGTGACGGTGGTGGTGACAATGAGAACGAGTTCGAGAGGTTTGACGATGAACAATTCATGTCCATGTTCACTGATGAAGCTTCGGGGAATAATAATAACAACAACAACAATAATGATACCAATAACAACATCAACGACAACTACAATAGTTACAATAGTAACAATAACACCATGATGGCTCTCACACTTTCCTCCTCCAACCCTTCTACACCCTCTGATCACAACAGCATCAACGACGAGAAGGAGATGAACAAGGAAAAGGAGGAGGAGGAGCACGAGAAGAAGCATGTCAAGAATGAGTCAGATGAGGATGAAAGCCAATGCAAGCAAGAAATCACACAAAACCCCGATGATAGTAATCATAGTAACGCAAATGCAGCGCCTTGTTCCAGTGAGAAAATCACAGACCCCAAGAGGGTCAAAAGAATCCTGGCAAATAGACAATCGGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATTTCTGAACTTGAACGAAGTGTGACTTCATTACAGGCTGAAGTTTCTGTATTGTCTCCACGAGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAACAGTGCTTTGAAGCAAAGAATCGCAGCGCTGGCCCAAGATAAGATCTTCAAAGATGCACATCAAGAAGCACTGAAGAGGGAGATAGAGAGACTGAGGCAAGTGTATCAGCAACAAAACATAAAGAAGATGGAGAATGGTACAGGGTCAACATCCCAATCTCCATTACCATCTCCAAAACCACGATGTGACACACTCACTGAAAAGGAACAACTTATCAATGTCTGA 1056 0.4508 MAQLPPKVPNMAPNWPDFSSPHQKMPSLKTMAPNISNQNPSWVDEFLDFSAARRGAHRRSVSDSIAFLEAPMLDHHCKSRGSDGGGDNENEFERFDDEQFMSMFTDEASGNNNNNNNNNDTNNNINDNYNSYNSNNNTMMALTLSSSNPSTPSDHNSINDEKEMNKEKEEEEHEKKHVKNESDEDESQCKQEITQNPDDSNHSNANAAPCSSEKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYQQQNIKKMENGTGSTSQSPLPSPKPRCDTLTEKEQLINV 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01285 351 CDD bZIP_plant_RF2 220 270 IPR044759 GO:0003700|GO:0006355
Viun11g01285 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 217 269 IPR004827 GO:0003700|GO:0006355
Viun11g01285 351 MobiDBLite consensus disorder prediction 318 351 - -
Viun11g01285 351 Pfam bZIP transcription factor 219 262 IPR004827 GO:0003700|GO:0006355
Viun11g01285 351 MobiDBLite consensus disorder prediction 318 336 - -
Viun11g01285 351 Gene3D - 218 317 - -
Viun11g01285 351 MobiDBLite consensus disorder prediction 193 211 - -
Viun11g01285 351 MobiDBLite consensus disorder prediction 105 155 - -
Viun11g01285 351 SMART brlzneu 215 279 IPR004827 GO:0003700|GO:0006355
Viun11g01285 351 MobiDBLite consensus disorder prediction 156 192 - -
Viun11g01285 351 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 222 237 IPR004827 GO:0003700|GO:0006355
Viun11g01285 351 MobiDBLite consensus disorder prediction 105 216 - -
Viun11g01285 351 Coils Coil 344 351 - -
Viun11g01285 351 Coils Coil 294 318 - -
Viun11g01285 351 Coils Coil 159 188 - -
Viun11g01285 351 SUPERFAMILY Leucine zipper domain 219 273 IPR046347 GO:0003700|GO:0006355
Viun11g01285 351 FunFam Basic leucine zipper 61 218 291 - -
Viun11g01285 351 PANTHER BASIC LEUCINE ZIPPER 34 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01285 Viun-Chr11 27758025 27761614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01285 1 296 bZIP Transcription Factor Family AT3G58120 58.095 6.86e-103 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun11g01285 bZIP_1 3.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01285 - - gmx:778128 494.197