Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01229 ATGGGTTTTCGTTTACCTGGAATCAGAAAGGTAATATCTGCAGCAAATCATGCATCTTCAAAAGCAGTTGATGCACAAAAGGGCTATCTTGCTGTGTATGTGGGAGAGAAAATGAAGCGATTTATGATTCCTGTATCATACTTGAACAAACCTTCCTTCCAAGACTTGTTGAGTAAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGAAATCTTCCATCGTATAACTTCTTGCTTGGATGGACAATAG 279 0.405 MGFRLPGIRKVISAANHASSKAVDAQKGYLAVYVGEKMKRFMIPVSYLNKPSFQDLLSKAEEEFGYDHPMGGLTIPCSEEIFHRITSCLDGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01229 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Viun11g01229 92 Pfam Auxin responsive protein 14 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01229 Viun-Chr11 27401416 27402250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01229 24 92 Calmodulin-binding Proteins AT3G43120 50.725 6.38e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01229 K14488 - gmx:100820621 165.236