Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01219 ATGGGTTTCCGTTTACCTGCTATTCGACGAGCATCATTCAAAGCTAGCCAAGCAGCTTCAAATTCTGTAGAAGTCCCAAAAGGCTATCTTGCGGTGTATGTTGGAGAGAAACAAAAGCGCTTTGTGATTCCCATAACATACTTGAACCAACCTTCATTTCAAGACTTGTTGAGTAAAGCTGAAGAAGAGTTTGGATATGATGATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGAAATCTTCCATCGTATAACTTCTTGCTTGGATGGACAATAG 279 0.4194 MGFRLPAIRRASFKASQAASNSVEVPKGYLAVYVGEKQKRFVIPITYLNQPSFQDLLSKAEEEFGYDDPMGGLTIPCSEEIFHRITSCLDGQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01219 92 Pfam Auxin responsive protein 10 89 IPR003676 GO:0009733
Viun11g01219 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01219 Viun-Chr11 27083881 27084681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01219 24 92 Calmodulin-binding Proteins AT3G43120 50.725 3.18e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01219 K14488 - gmx:106795238 157.532