Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01218 ATGGGGTTTCGTTTACCTGTTATCAGAAAGGCCTTATTTGCAGCAAATCAAATTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTGTCGTTCTTGAACCAACCCTCGTTTCAGGACTTGTTGAGTAAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTTACAATTCCTTGCAGCGAAGATGTCTTCTTAAGTATAACGTCTTGCTTCAACTGA 237 0.4262 MGFRLPVIRKALFAANQIAVYVGEKMKRFVIPVSFLNQPSFQDLLSKAEEEFGYDHPMGGLTIPCSEDVFLSITSCFN 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01218 78 Pfam Auxin responsive protein 16 75 IPR003676 GO:0009733
Viun11g01218 78 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 17 76 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01218 Viun-Chr11 27073008 27073463 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01218 18 77 Calmodulin-binding Proteins AT3G43120 50.000 9.67e-16 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01218 K14488 - gmx:100820621 137.117