Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01217 ATGGGGTTTCGTTTACCTGTTATCAGAAAGGCCTTATTTGCAGCAAATCAAGCATCTTCGAAAGCAGTGGATGCACAAAAGGGCCATCTTGCAGTCTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTGTGTCGTTCTTGAACCAACCTTCATTCCAGGACTTGTTGAGTAAAGCTGAAGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTTTTCTTAAGCATAACATCTTGCTTGAATTGA 273 0.4286 MGFRLPVIRKALFAANQASSKAVDAQKGHLAVYVGEKMKRFVIPVSFLNQPSFQDLLSKAEEEFGYDHPMGGLTIPCSEDVFLSITSCLN 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01217 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Viun11g01217 90 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01217 Viun-Chr11 27069060 27069719 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01217 6 89 Calmodulin-binding Proteins AT3G43120 42.553 1.63e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01217 K14488 - gmx:100820621 164.851