Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01198 ATGGAAGAGGGACGAGAAGATGCAGCTCCAGCAGAGCAAAGGCCATCTAACATGTCATGGTGGCCTTCAGATTTTGTTGAAAATTTTGCATCCGTTTCTTTGAGCTCTCAAGATGAAACCTTAAATAATAAAGAATTAGCAGGACATGCTAACCAAGATGTTATGTCCCCTCAAAAGGCGTCACAAATTCTCTGGCGCACTGGAATGCTTTCTGAACCAATACCCAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTAGATGAGCTTCAAGCTTTGGGTGGAGAGGCTTTTAGGGCTGATGTCATTGTTGTGGATTCAGAGAGAGATAGAAGGTTATCTATGTTGAAGCAACTAATTGTGGCATTGGTTAAAGGATTGAATTCAAATCCACCAGCAATGATTAAGAAGATAGCTGGATTAGTTTCTGACTTTTATAAGCGACCAAACGTAGAAAGTCTAGCTAAAGCTGCACTTGAGGAATCCTCCCACATGTTTGAGAATCATGGTGTCCAGATGCTGGGGCAAATAAGACATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTGGAAAGTAGGCTTATGATGGGTTTTCCCAATGATGGGGCTGCTGATTGTGTTGACTCGTACAAGCATATGTCAGTTATTGTTGTGTTAAATTCTGTGGAATTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTATTACCACGATCAACAAAATCAATTCTTATGACACACATTTCTGCAGCTGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGAGTTTCAGATAGCAGTGTTGAAAAGGAGGAAAATCTTCAATTCCACAGAAGATTTGAAGTATCTTCAAATGTATCTGGCCTTCCCTTGCGAAACAGGATGTTACGATCATATACCAGTCTAGAAAGAAATTTGAGTTTTTCACACAGTGAACCCAACATTGGAACTGCGTTTGGTCGGCGGAGTCGGAGAAAGGTCATTGCTGATCAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGCGTGCACATGGACTGTCTAAGCTTAGTGGTGACAGAACTGCTTTTAGAGATTTTGCTGATGACCAGTCTACACCAAGATCCAGCTATAAGTCAGATGGTGCTTCCTCATCAGAAGCTCGTCGAATACGAAGAAGAAGTATCAGCATGACGCCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAATCATTAAAGCAAAAACGTCTTCTGAGAGAGAAAGAGACCGGTGATAGTTCATTGTCTCATTCACCAAATGATAGAGCCGGCAGTATGGATCTTCTGAAACAAAAGTCAAATTTCAATATTGATGGTCATCAAGAGAGGTCCCCCTTGTATTCGCTACACCATGACCCTGTAACGTCTCAAAAGGCAATGTCATTACCCTCATCCCCGCACGATTATAGAGGACAAGCTTCTGAGAGAAGCGGAGTGTCAGAATATCCAATGAATGACGAACTGGAGTCTACTTGGAATAAAGTCCTTCAATCGCCAATGTTCAATGATAGAACTCTGTTGCCATATGAAGAATGGAACATCGATTTCACAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTCGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTCGCAATCAAAGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAACGTTATCTTATTTCTTGGTGCATGCACAAAGCCCCCACGGTTGTCAATGGTGACTGAATACATGGAGATGGGCTCTTTGTTTTACTTGATTCATGTGAGTGGTCAAAAGAAGAAGCTTAGTTGGCGCAGAAGACTAAAGATGTTGCGGGACATATGCCGGGGCCTAATCCACATACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACCGTGAAAATATGTGATTTTGGACTTTCAAGAATAATAACAGAGTCTCCCATGAGAGATTCCTTGTCAGCTGGAACCCCGGAATGGATGGCTCCTGAACTTATTCGAAATGAACCATTCACCGAAAAATGTGATATATTTAGCTTGGGGGTCATAATGTGGGAGCTCTGCACCTTGAATAGGCCATGGGAAGGCGTGCCTCCGGAGAGGCTTGCTGATTAG 2310 0.4225 MEEGREDAAPAEQRPSNMSWWPSDFVENFASVSLSSQDETLNNKELAGHANQDVMSPQKASQILWRTGMLSEPIPNGFYSVIPEKRLKKLFDSIPTLDELQALGGEAFRADVIVVDSERDRRLSMLKQLIVALVKGLNSNPPAMIKKIAGLVSDFYKRPNVESLAKAALEESSHMFENHGVQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAADCVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSDSSVEKEENLQFHRRFEVSSNVSGLPLRNRMLRSYTSLERNLSFSHSEPNIGTAFGRRSRRKVIADQRTASSSPEHPSLRAHGLSKLSGDRTAFRDFADDQSTPRSSYKSDGASSSEARRIRRRSISMTPEIGDDIARAVRAMNESLKQKRLLREKETGDSSLSHSPNDRAGSMDLLKQKSNFNIDGHQERSPLYSLHHDPVTSQKAMSLPSSPHDYRGQASERSGVSEYPMNDELESTWNKVLQSPMFNDRTLLPYEEWNIDFTELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLIHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITESPMRDSLSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERLAD 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01198 769 MobiDBLite consensus disorder prediction 352 420 - -
Viun11g01198 769 MobiDBLite consensus disorder prediction 442 457 - -
Viun11g01198 769 SMART serkin_6 561 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01198 769 MobiDBLite consensus disorder prediction 498 519 - -
Viun11g01198 769 SUPERFAMILY Protein kinase-like (PK-like) 535 766 IPR011009 -
Viun11g01198 769 ProSiteProfiles Protein kinase domain profile. 561 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01198 769 FunFam Serine/threonine-protein kinase isoform 1 551 639 - -
Viun11g01198 769 CDD STKc_MAP3K-like 567 768 - -
Viun11g01198 769 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 309 760 - -
Viun11g01198 769 Pfam Protein tyrosine and serine/threonine kinase 562 766 IPR001245 GO:0004672|GO:0006468
Viun11g01198 769 ProSitePatterns Protein kinases ATP-binding region signature. 567 588 IPR017441 GO:0005524
Viun11g01198 769 MobiDBLite consensus disorder prediction 498 513 - -
Viun11g01198 769 Gene3D Phosphorylase Kinase; domain 1 554 638 - -
Viun11g01198 769 MobiDBLite consensus disorder prediction 272 296 - -
Viun11g01198 769 MobiDBLite consensus disorder prediction 442 468 - -
Viun11g01198 769 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Viun11g01198 769 MobiDBLite consensus disorder prediction 393 408 - -
Viun11g01198 769 Gene3D Transferase(Phosphotransferase) domain 1 639 768 - -
Viun11g01198 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Viun11g01198 769 MobiDBLite consensus disorder prediction 272 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01198 Viun-Chr11 26357274 26368161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01198 1 768 MAP Kinase Kinase Kinase AT3G58640 67.788 0.0 1055
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun11g01198 PK_Tyr_Ser-Thr 3.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01198 - - gmx:100807193 1387.09