Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01196 ATGGAAGAGGGACGAGAAGATGCAGCTCCAGCAGAGCAAAGGCCATCTAACATGTCATGGTGGCCTTCAGATTTTGTTGAAAATTTTGCATCCGTTTCTTTGAGCTCTCAAGATGAAACCTTAAATAATAAAGAATTAGCAGGACATGCTAACCAAGATGTTATGTCCCCTCAAAAGGCGTCACAAATTCTCTGGCGCACTGGAATGCTTTCTGAACCAATACCCAATGGTTTTTATTCAGTTATTCCGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCTACTTTAGATGAGCTTCAAGCTTTGGGTGGAGAGGCTTTTAGGGCTGATGTCATTGTTGTGGATTCAGAGAGAGATAGAAGGTTATCTATGTTGAAGCAACTAATTGTGGCATTGGTTAAAGGATTGAATTCAAATCCACCAGCAATGATTAAGAAGATAGCTGGATTAGTTTCTGACTTTTATAAGCGACCAAACGTAGAAAGTCTAGCTAAAGCTGCACTTGAGGAATCCTCCCACATGTTTGAGAATCATGGTGTCCAGATGCTGGGGCAAATAAGACATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTGTTAGCAGATACTGTAGGTCTGGAAAGTAGGCTTATGATGGGTTTTCCCAATGATGGGGCTGCTGATTGTGTTGACTCGTACAAGCATATGTCAGTTATTGTTGTGTTAAATTCTGTGGAATTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTATTACCACGATCAACAAAATCAATTCTTATGACACACATTTCTGCAGCTGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGAGTTTCAGATAGCAGTGTTGAAAAGGAGGAAAATCTTCAATTCCACAGAAGATTTGAAGTATCTTCAAATGTATCTGGCCTTCCCTTGCGAAACAGGATGTTACGATCATATACCAGTCTAGAAAGAAATTTGAGTTTTTCACACAGTGAACCCAACATTGGAACTGCGTTTGGTCGGCGGAGTCGGAGAAAGGTCATTGCTGATCAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGCGTGCACATGGACTGTCTAAGCTTAGTGGTGACAGAACTGCTTTTAGAGATTTTGCTGATGACCAGTCTACACCAAGATCCAGCTATAAGTCAGATGGTGCTTCCTCATCAGAAGCTCGTCGAATACGAAGAAGAAGTATCAGCATGACGCCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAATCATTAAAGCAAAAACGTCTTCTGAGAGAGAAAGAGACCGGTGATAGTTCATTGTCTCATTCACCAAATGATAGAGCCGGCAGTATGGATCTTCTGAAACAAAAGTCAAATTTCAATATTGATGGTCATCAAGAGAGGTCCCCCTTGTATTCGCTACACCATGACCCTGTAACGTCTCAAAAGGCAATGTCATTACCCTCATCCCCGCACGATTATAGAGGACAAGCTTCTGAGAGAAGCGGAGTGTCAGAATATCCAATGAATGACGAACTGGAGTCTACTTGGAATAAAGTCCTTCAATCGCCAATGTTCAATGATAGAACTCTGTTGCCATATGAAGAATGGAACATCGATTTCACAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTCGGAGAAGTTTTCCGTGGCATATGGAATGGCACAGATGTCGCAATCAAAGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAACGTTATCTTATTTCTTGGTGCATGCACAAAGCCCCCACGGTTGTCAATGGTGACTGAATACATGGAGATGGGCTCTTTGTTTTACTTGATTCATGTGAGTGGTCAAAAGAAGAAGCTTAGTTGGCGCAGAAGACTAAAGATGTTGCGGGACATATGCCGGGGCCTAATCCACATACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCAAATTGTCTTGTGGACAAGCATTGGACCGTGAAAATATGTGATTTTGGACTTTCAAGAATAATAACAGAGTCTCCCATGAGAGATTCCTTGTCAGCTGGAACCCCGGAATGGATGGCTCCTGAACTTATTCGAAATGAACCATTCACCGAAAAATGTGATATATTTAGCTTGGGGGTCATAATGTGGGAGCTCTGCACCTTGAATAGGCCATGGGAAGGCGTGCCTCCGGAGAGGGTGGTTTATACCGTTGCTAACGAGGGTTCTCGATTGGATATTCCCGAAGGCCCGCTAGGCAGGCTGATTTCAGAGTGTTGGGCGGAACCACATGAACGGCCAAGTTGCGAGGAGATCCTCTCTCGCTTGGTGGACATCCAGTACTCTCTGTTTTGA 2454 0.4291 MEEGREDAAPAEQRPSNMSWWPSDFVENFASVSLSSQDETLNNKELAGHANQDVMSPQKASQILWRTGMLSEPIPNGFYSVIPEKRLKKLFDSIPTLDELQALGGEAFRADVIVVDSERDRRLSMLKQLIVALVKGLNSNPPAMIKKIAGLVSDFYKRPNVESLAKAALEESSHMFENHGVQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAADCVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSDSSVEKEENLQFHRRFEVSSNVSGLPLRNRMLRSYTSLERNLSFSHSEPNIGTAFGRRSRRKVIADQRTASSSPEHPSLRAHGLSKLSGDRTAFRDFADDQSTPRSSYKSDGASSSEARRIRRRSISMTPEIGDDIARAVRAMNESLKQKRLLREKETGDSSLSHSPNDRAGSMDLLKQKSNFNIDGHQERSPLYSLHHDPVTSQKAMSLPSSPHDYRGQASERSGVSEYPMNDELESTWNKVLQSPMFNDRTLLPYEEWNIDFTELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICRGLIHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIITESPMRDSLSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYTVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIQYSLF 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01196 817 SUPERFAMILY Protein kinase-like (PK-like) 535 809 IPR011009 -
Viun11g01196 817 MobiDBLite consensus disorder prediction 352 420 - -
Viun11g01196 817 MobiDBLite consensus disorder prediction 442 457 - -
Viun11g01196 817 MobiDBLite consensus disorder prediction 498 519 - -
Viun11g01196 817 Gene3D Phosphorylase Kinase; domain 1 554 639 - -
Viun11g01196 817 SMART serkin_6 561 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01196 817 ProSitePatterns Protein kinases ATP-binding region signature. 567 588 IPR017441 GO:0005524
Viun11g01196 817 Gene3D Transferase(Phosphotransferase) domain 1 640 816 - -
Viun11g01196 817 MobiDBLite consensus disorder prediction 498 513 - -
Viun11g01196 817 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 309 809 - -
Viun11g01196 817 MobiDBLite consensus disorder prediction 272 296 - -
Viun11g01196 817 CDD STKc_MAP3K-like 567 809 - -
Viun11g01196 817 MobiDBLite consensus disorder prediction 442 468 - -
Viun11g01196 817 MobiDBLite consensus disorder prediction 393 408 - -
Viun11g01196 817 Pfam Protein tyrosine and serine/threonine kinase 562 809 IPR001245 GO:0004672|GO:0006468
Viun11g01196 817 ProSiteProfiles Protein kinase domain profile. 561 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01196 817 FunFam Serine/threonine-protein kinase isoform 1 551 639 - -
Viun11g01196 817 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Viun11g01196 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 680 692 IPR008271 GO:0004672|GO:0006468
Viun11g01196 817 MobiDBLite consensus disorder prediction 272 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01196 Viun-Chr11 26357274 26368537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01196 1 816 MAP Kinase Kinase Kinase AT3G58640 68.088 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Viun11g01196 PK_Tyr_Ser-Thr 8.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01196 - - gmx:100807193 1485.32