Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01169 ATGATGTCCAGATCGTATACAAATCTTTTAGATTTGGCCTCTGGGAATTTCCCGGCAATGGGGAGGGAGACTAGGGAAAGGAGGCGGATGCCGAGGGTTATGAGTGTTCCAGGGTTTCTCACTGAGGTAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAACCCGTCGACAATTACTACGGATAGAATGATCATTGTGGCTAACCAGTTACCATTGAAGGCAAAGCGAAGAGAGGACAACAAAGGGTGGTCTTTCAGTTGGAATGAAGATTCGTTACTTTTACAGCTTAAGGATGGACTTCCGGATGATATGGAAGTTCTTTATGTTGGTTCCTTACGCGTTGATATTGATCCAGCAGAACAGGATGACGTGTCTCAGAATTTGTTGGATAAATTCAAATGTGTTCCGACTTTTTTACCTGCTGACGTTTTGGCAAAATTTTATGATGGTTTTTGTAAAAGGCAATTATGGCCCCTTTTTCATTACATGCTACCATTTTCAACAGACAAAAGCCATCGATTTGATCGCACTTTGTGGGAAGCTTATGTGCTAGCAAACAAGCTATTTTTTCAGAAGGTAGTTGAAATAATAAACCCTGAGGATGATTACATTTGGATTCATGATTACCATTTGATGGTGCTGCCAACTTTTATAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTGCATAGCCCCTTTCCATCTTCAGAGATTTACAGGACTCTTCCTGTAAGGGAAGAGATACTGAAAGCTTTGCTGAACTCTGATATCATCGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCCTGCTGCAGTCGTATGTTGGGTCTGGAGTATCAGTCTAAGAGGGGTTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGTCGGATTGATTCAGTCATGAGAATGGCAGTTGAGGAGACCACGGTTAAGGAGCTCAAACATAAATTCCAAGGGAAAACCATCTTACTTGGTGTTGATGACATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCGATGGAGCAGATGCTCAGACAGCATCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAAATAGTTAATCCTGCTAGAGGGAAAGGGATACATCTGGAAGAGATACATGCTGAAATACAAGAAAGCTGCACCAGGATCAACAGAGTGTTTGGGCGGCCTGGTTATGAACCTATTGTTTTTATAGATAGAGCAGTATCTATTGCTGAAAAAATTGCCTATTACAGCATTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCTGAATCATGTTCCAATGCCAGTGACCCAAAGAAGAGTATGCTGGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCCATCTCAATGAGTGATGGGGAGAAACAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACCCATGATGTGGCTTACTGGTCACGTAGTTTTTTGCAAGACATGGAGCGGGCTTGCACAGATCTTCTAAGGAAGAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCACTTGATCCTAATTTTAAAAAGCTCTCAATTGATGCTATGGTCTCAGCTTACAAGAGGTCAAAGAGTAGGGCAATTTTGTTGGACTATGATGGTACTGTGATGCCGCAGAACTCCATTAACAAGAGTCCAAGCAAGGAGGTCTTGTCTATTATGGAATCACTTAGTGCAGACCCAAAAAATATTGTTTTCATTGTTAGTGGAAGGGGGAGAGAGAGCTTAAGTGAGTGGTTTACTCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGGTACTTCTTGAGATGGGGCCACAATGGAGAATGGGAAATTTGTGGTAAGTCCTCCGACTTTGGATGGATGCAGATAGCTGAACCTGTGATGAAACTATATACTGAGGCAACTGATGGCTCCTCAATTGAAAGAAAAGAAAGTGCTTTAGTCTGGCAGTACCGTGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCCGTGAAGAGTGGCCAGTTTATTGTTGAAGTAAAACCACAGGATGTGAGCAAAGGTTTGGTGGCCGAAAGGATATTTTCGTCAATGGACGGTAAAGGCAAGCAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGGAATATTCTTGCCCCCAATGCTTCTGTCTTTGCTTGCACGGTTGGACAAAAGCCAAGCAAAGCAAAGTATTATCTGGATGATACAACCGAGGTAACAAGCATGCTAGAATCTTTGGCCGAAGAATCAGATTCTTCACCCTGCATACAAGAAACTGTGGATTCCTCTCGGAGGCAAGTTCAGGTTTCTCTGATTTAG 2601 0.4229 MMSRSYTNLLDLASGNFPAMGRETRERRRMPRVMSVPGFLTEVDDDQAVSVSSDNPSTITTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQNLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIDSVMRMAVEETTVKELKHKFQGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEEIHAEIQESCTRINRVFGRPGYEPIVFIDRAVSIAEKIAYYSIAECVIVTAVRDGMNLTPYEYIACRQGISDSESCSNASDPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRSKSRAILLDYDGTVMPQNSINKSPSKEVLSIMESLSADPKNIVFIVSGRGRESLSEWFTPCKKLGIAAEHGYFLRWGHNGEWEICGKSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMDGKGKQADFVLCVGDDRSDEDMFEIVSSAISRNILAPNASVFACTVGQKPSKAKYYLDDTTEVTSMLESLAEESDSSPCIQETVDSSRRQVQVSLI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01169 866 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Viun11g01169 866 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Viun11g01169 866 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Viun11g01169 866 Gene3D Glycogen Phosphorylase B; 56 317 - -
Viun11g01169 866 NCBIfam trehalose-phosphatase 590 841 IPR003337 GO:0003824|GO:0005992
Viun11g01169 866 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 842 IPR001830 GO:0003824|GO:0005992
Viun11g01169 866 NCBIfam HAD-IIB family hydrolase 595 799 IPR006379 -
Viun11g01169 866 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Viun11g01169 866 Gene3D - 721 852 IPR023214 -
Viun11g01169 866 Gene3D - 592 693 IPR023214 -
Viun11g01169 866 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Viun11g01169 866 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Viun11g01169 866 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Viun11g01169 866 FunFam Alpha,alpha-trehalose-phosphate synthase 317 530 - -
Viun11g01169 866 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Viun11g01169 866 SUPERFAMILY HAD-like 593 841 IPR036412 -
Viun11g01169 866 Gene3D Glycogen Phosphorylase B; 318 530 - -
Viun11g01169 866 CDD HAD_TPP 594 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01169 Viun-Chr11 25854163 25859093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01169 1 847 Trehalose Biosynthesis Gene Families AT1G06410 78.630 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01169 K16055 - gmx:100811463 1632.85