Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01136 ATGGCTTGCAACAAAATTCAACGCAACTCTTCATCACGCACTAAGAATTTTGATGTGTTTGTTAGCTTTAGAGGTGAAGATACCCGTAACGGTTTCACAAATCATCTTTTTGCAGCTCTTCAAAGAAAAGGAGTTGTTGCCTTCAGAGATGACTACACAATCCAGAAAGGGGAGTTCTTGGAGTCTGAGCTCTTGCAAGCAATTGAAGGATCACGTGTTTTCATTGTCGTCTTCTCAAAGGACTATGCATCATCCACATGGTGCATGCAAGAGCTTACAAAAATCGTTGGCTGGGTTCAACAAACAGGGCGAAGTTTGCTCCCTATCTTCTATGATGTCGATCCTTCTGAGGTTCGAAAACAGAGTGGAGAGTTTGAAAAAGCTTTTGCTGAACACGAACAAAGGTTCAAAGATGACATGGAAATGATAAAAACATGGAGGGCAGCTCTCAAAACAAGTTGTGATCGTTGTGGGTGGGATCTGAAAAATAAGAAACAATATGAAGAAATTGAAAACGTTGTTGAAAAGGTAATCGACATATTGGGTCGTAATCAAATTTGGAGTTTTGGAGATGATTTAGTTGACATGCATTCTCGTGTTAAGCAATTGGAAGAAGTTCTAGATCTGAGTGCTAATGATACTGTTCGCCTTGTGGGACTTTGTGGGATGGGTGGAATAGGGAAGACGACACTTGCAACTGCATTGTTTAATAAAATCTCTCCTCAATATAATGCTTCTTGTTACATTGATGATGTAAGCAAAACTTATTATAATTTTGGAGCAACAAATGCTCAAAAACAACTTCTTTGTCAAATTCTAAATCAAGGAAATATGGAGATACATAATGTTTCCCATGGAACTATGTTGATAAGGACTAGACTATGTCACTTAAAGACGCTTGTCGTTCTTGATAATGTTGATGAAGTTGAACAATTAGAGAAATTAGGTTTGCATCCTGAATATCTAGGTGCAGGGAGTAGACTCATCATAATTTCTAGAGATTCTCGTATCCTAAAAAAATATGGAGTAAGTGAAGTTTACAATGTTCAAGTCTTGGATGAAACTCAAGCTCTTCAATTATTTTCCAAAATAGCTTTCAGATCTAACAATATTAGGAAAGAATACAAGGAGTTAACATTTGATGTTCTGAAGTATGTTAGAGGTCTTCCATTAGCAATTAAAGTGTTGGGGACATTTTTACATGATCGAGACGTTTGTGAATGGAGAAGTGCGCTGATTAGAATGAAAGAAAATCCAAAAAAAGACATCATGGATGTGTTGCGAATAAGTTTTGATGGATTGGAAAATCTAGAAAAAGAAATATTTCTAGATATTGCTTGTTTCTTCAACAAGTATGGGGTGTGGGAAGTGAAGAAACTTCTAGACTATCGGCAATTTTATCCAGACATTGGTATGCAAGTTTTGATCGAGAAATCACTTATAAGTTATCAAGATGAGGAGATTGAAATGCATGACTTGTTGAAAGAGTTGGGTAGGATTATTGTTCGAGAAAAAGCACCAAAAGAACCAAGAAAGTGGAGCAGAGTGTGGAGCTACAAGGATTTCCAAGAGGTTATGGAAATAAATAAGGAAGCAGAAAATGTTGAAGCTATAGTTATTGAACAGTATCCGGAAGAGTTTCTACAAGGAAGAATAAGAGTGGATGCTCTCTCCAAAATGGATCACCTAAAGTTGCTCATTCTTAAGAATGTAAATTGTTTTGGAACTCTAAATTACATTTCTAATGAATTGAGATATCTGTTTTGGAATCACTTTCCTTGGATGTTTTTGCCATCAACTTTCCATTTAGATCAACTAGTAGAATTGATCATGCCTCATAGCAATATGAAGAAATTATGGGAAGGCAAAAAGTGTCTGCCTAATTTGCGAAGGATGGATCTGAGCCACTCCAAAAATCTTATTGGGGTGCCCGACTTAAGTGAGGTTCAACGTCTTACGTTTCTTGATCTTGAAGGATGCATAAAAATTGTCGGTATTCATCCATCCATTGGTATTCTAAGAGAACTTCATTATTTGAATTTGAAAAATTGTAAAAATCTTGTCCTTAATCTGAATATCTTATTTGCGCTCAGTTCTCTTAGGACTTTAATTCTCTCTGGTTGTTTAAAATTACTTAATAGTAAGATGCTAATGGACCCAAGTGACACAAAACATTTGGAGGAAGTTGTTAAAATTACAAATGTCATCCAATTCCCAACATCATCTGTATACAGACTACTAATGTTGCCTTTCCATATTTTCTACCCTTCAAAACCTGAAGATTCACTTGGTATGGTATTGTCTTCTTTGTCTTGTGTCCCTTGTTTGGTGCATCTTGATATAAGCTTCTGCAATCTACTTCAAGTACCAGATGAAATTAAGAACTTACGTTCTTTAGTAGGATTAAATTTGGGGGGAAACAAATTTGTAACACTACCAAGTAGCATCAAGCTACTTTCCAATCTTCAACGTTTGAACTTGGAACACTGCAAGCAGCTGAAATATTTGCCCGAGCTTCCAACAATGAAAGAAAAACAAATTGGCACATACTATGTTGGATTATACATTTTTGATTGCCCCAAGTTGTGTGATATGGAGCATTGTTATAGCACTGTTTTTTCTTGGATGACTCAAAATCTCCAGGTTTGCTTGCAACCTACTATTTCCTCAGCTCATGTGGCTATTGTAATTCCTGGAAGTGAAATCCCAAAGTGGTTCAATAAACAAAAGGCAAGTACATCAATAAGTATGGACCCATCTGCTGTTATAGATGATCCAAATTGGATTGGTGTTGCCATTTGTGTTCTATTTGTCACACACCAAGATCCCACGAATTTGGTTGAAAGATATGATAATAGTTCCCATACTTTTTCTTATGGTGTCAATAATGTCAACCTTTGGCCAAAATCGTATTCAGTAGCTCCAATGCATTTCAAGAAAGACCTGGTGACAGCTGGATTCGACCACTTGTTGACGGTGTTTTACTCTCGACAAGAATTCATTCATCTTCTAAGCAGCCATCCAAATACCATGCATGATCTTCATGGAATTGAATTTGAAACTTGGATTCAAAGTCCTAAAGGTTTATGTGTTGTGGTGAAGAATTGCGGGTATCGTTGGGTATTTAAGGAGGATCTTCAACAATTCAACTCAAACATGTTTTTCAGTGGAAATTCTTCTTCTCGAAAGAGGAAACTACTAACACGTCATTAA 3213 0.3654 MACNKIQRNSSSRTKNFDVFVSFRGEDTRNGFTNHLFAALQRKGVVAFRDDYTIQKGEFLESELLQAIEGSRVFIVVFSKDYASSTWCMQELTKIVGWVQQTGRSLLPIFYDVDPSEVRKQSGEFEKAFAEHEQRFKDDMEMIKTWRAALKTSCDRCGWDLKNKKQYEEIENVVEKVIDILGRNQIWSFGDDLVDMHSRVKQLEEVLDLSANDTVRLVGLCGMGGIGKTTLATALFNKISPQYNASCYIDDVSKTYYNFGATNAQKQLLCQILNQGNMEIHNVSHGTMLIRTRLCHLKTLVVLDNVDEVEQLEKLGLHPEYLGAGSRLIIISRDSRILKKYGVSEVYNVQVLDETQALQLFSKIAFRSNNIRKEYKELTFDVLKYVRGLPLAIKVLGTFLHDRDVCEWRSALIRMKENPKKDIMDVLRISFDGLENLEKEIFLDIACFFNKYGVWEVKKLLDYRQFYPDIGMQVLIEKSLISYQDEEIEMHDLLKELGRIIVREKAPKEPRKWSRVWSYKDFQEVMEINKEAENVEAIVIEQYPEEFLQGRIRVDALSKMDHLKLLILKNVNCFGTLNYISNELRYLFWNHFPWMFLPSTFHLDQLVELIMPHSNMKKLWEGKKCLPNLRRMDLSHSKNLIGVPDLSEVQRLTFLDLEGCIKIVGIHPSIGILRELHYLNLKNCKNLVLNLNILFALSSLRTLILSGCLKLLNSKMLMDPSDTKHLEEVVKITNVIQFPTSSVYRLLMLPFHIFYPSKPEDSLGMVLSSLSCVPCLVHLDISFCNLLQVPDEIKNLRSLVGLNLGGNKFVTLPSSIKLLSNLQRLNLEHCKQLKYLPELPTMKEKQIGTYYVGLYIFDCPKLCDMEHCYSTVFSWMTQNLQVCLQPTISSAHVAIVIPGSEIPKWFNKQKASTSISMDPSAVIDDPNWIGVAICVLFVTHQDPTNLVERYDNSSHTFSYGVNNVNLWPKSYSVAPMHFKKDLVTAGFDHLLTVFYSRQEFIHLLSSHPNTMHDLHGIEFETWIQSPKGLCVVVKNCGYRWVFKEDLQQFNSNMFFSGNSSSRKRKLLTRH 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01136 1070 PRINTS Disease resistance protein signature 293 307 - -
Viun11g01136 1070 PRINTS Disease resistance protein signature 217 232 - -
Viun11g01136 1070 PRINTS Disease resistance protein signature 386 400 - -
Viun11g01136 1070 PRINTS Disease resistance protein signature 624 640 - -
Viun11g01136 1070 Gene3D - 351 435 IPR042197 -
Viun11g01136 1070 Gene3D Ribonuclease Inhibitor 741 883 IPR032675 -
Viun11g01136 1070 ProSiteProfiles TIR domain profile. 15 178 IPR000157 GO:0007165
Viun11g01136 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 715 IPR044974 GO:0006952
Viun11g01136 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 445 IPR027417 -
Viun11g01136 1070 Gene3D Ribonuclease Inhibitor 477 728 IPR032675 -
Viun11g01136 1070 Pfam C-JID domain 897 1046 IPR045344 -
Viun11g01136 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Viun11g01136 1070 SUPERFAMILY L domain-like 491 884 - -
Viun11g01136 1070 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Viun11g01136 1070 Pfam Leucine Rich Repeat 605 624 IPR011713 -
Viun11g01136 1070 Gene3D - 10 185 IPR035897 -
Viun11g01136 1070 Gene3D - 186 346 IPR027417 -
Viun11g01136 1070 SMART till_3 16 156 IPR000157 GO:0007165
Viun11g01136 1070 Pfam NB-ARC domain 200 418 IPR002182 GO:0043531
Viun11g01136 1070 Pfam TIR domain 16 174 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01136 Viun-Chr11 24879299 24883335 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01136 12 825 WRKY Transcription Factor Family AT4G12020 30.060 4.52e-81 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01136 - - vra:106780706 1580.84