Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01131 ATGGGTGGAATAGGGAAAACGACACTTGCAACTGCATTGTTTAATAAAATCTCTCCTCAATACGATGCTTGTTGTTACATTGATGATTTAAGCAAAATTTATTTTAATTTTGGAGCAACAAGTGCTCAAAAGCAACTTCTTTGTCAAGCTCTAAATCAAGGAAATATGGAGATACATAATGTTTCCCGTGGAACAATGTTGATGAAAAGTAGGCTATGTCGCTTAAAGACGCTTCTTGTTCTCGATAACGTTGACGAAGTTGAACATTTAGAGAAATTGGGTTTGCGTCCTGAATATCTAGGTGCAGGGAGTAGACTCATCATAATTTCTAGAGATCGTTGCATCTTACAAAGTTACGGAGTAAAGGAAGTTTACGACGTTCAACTGTTGGATAAAATTGAAGCTCTTCAATTATTTTGCAAAAAAGCTTTCAAATCTAACGATATTGGGAGAGAACATGAAGAGTTGACATTAGATGTTCTGCAGTATGCCAATGGTCTTCCGTTGGCAATTAAAGTATTGGGCTCACTTTTACACGATCGAGATGTTAGTGAATGGAGAAATGCATTGGCTAGAATGAAAGAAAATCCAAGCAAACATATCATGGATGTGTTGAGAATAAGTTATGATGCATTGGAGAATCTAGAGAAAGAAATATTTCTAGATATTGCTTGTTTCTTCTCCAATAGGAATAACTACTCTTATGAGACAAGAGTGAAGAGACTTCTAGAGTATCGCCAATTTTATCCTGACATTGGTATGAAAGTTTTGATCGAGAAATCACTAATAAGTTGTCAAGATGGGGAGATTGAAATGCATGACTTGTTGAAAGAGTTGGGTAAGAGTATCGTCCGAGAAAAAGCACCAAAAGAACCAAGAAAGTGGAACAGGTTATGGAACTACAAGGATCTCCAAAAAGTTATGAAAATAAATAAGGAAACCGAAAATGTTGAAGCTATAGTTATTCATCAGAGCGAAAAAGAGTTTCTAGAAGATGTGGATGCACTCTCAAAAATGAATCAACTGGAGTTGCTGATTCTAGAGAATGTGAACTGTTCTGGAACTCTGGATTGCATTTCTAATGAATTGAGATATCTACAATGGAATCACTTTCCTTTGATGTCTTTGCCATCAAATTTCCATCCAGATCAACTTGTAGAACTGATCCTGCCTCATAGCAATATCAAGAAATTATGGGAAGGCAAAAAGTTTCTGCCTAATCTGACAATGCTGGATATGAGTCACTCCAAATATCTTATTGCGGTGCCAGACTTAAGTGAGGTTCCACGTCTTGAGAGTCTTGATCTTGAAGGATGTATACAACTAGTCGAGATCCATCCATCCATTGGTATTCTAAGAGAACTTCGATGTTTGAATTTGAAAAATTGTAAAAATCTTGTCCTTAACCTGAATATGCTTTTTGGGATCAGTTCTCTTTCGGGCTTATATCTCTCTGGTTGTTCAAAATTACTTAATAGTAAGATGTTAATGGAGCCAAGGGACACAAAACATTTGGAGGAAATTGTTAAAATTACAAATGCCATTCAATTCCCAACATCCTCTGTATACAAACTTCTAATGTTGCCTTTCAATTTTCTCTACCCTCCAAAACCTGAAGATTCACTTGGTTTGGTATTGTCTTTGTCTTCTGTCCCATGTTTGGTTTATCTTGATATAAGCTTCTGCAATCTACTTCGAATCCCAGATGAAATTGGGAACTTACATTCTTTAGTAGGACTAAATCTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATCAAGCAACTTTCTAATCTTGAACGTTTGTACTTGGAATACTGCAAGCAGCTGAAATATTTGCCCGAGCTTCCAACAATAAAACAAAAAAATATTGGCGGATACTATGGGTTGGGATTATACATTTTTGATTGCACCAAGTTAAGTGATATGGAACACTGTTATAGCATGGTTTTTTCTTGGATGACGCAAAATCTTCAGGTTTTCTTCCAACCTACTATTTCCTCTGCTCGGATTGAAATGGAAATTGTTATTCCTGGAAGTGAAATTCCAAAGTGGTTCAATAAACAAAGTGCAAGTACATCAATAAGTATGGACCCATCTGATGTTATAGATGACCCAAATTGGATAGGTGTTGCCATTTGTGTTCTATTTGTCACACTCCAAGATCCTATGAATCTGGGTGAAAGAGATGATGATCATTTATCTAATCTTTGGTTCGGTGTCAATAATTCCAAGCGAAGATGGTATATAGGAGTTCCAATATATTTTAAGAAAGATCTAGTGACAGTTGGATTAGATCACTTGGTTACGGTGTTTTACTCTCGACAACAATTCATTCATCTTCTAAGCACACCTCCAAATACCATGCATGATCTCTATCAAACTGAATTTGGAACTTTTATTCATCATCCTAAAGGTTTACGAATTGTCGTGAAGAAGTGCGGGTATCGTTGGGTATTTAAGGAGGATCTTCAACAATTCAACTCAAACATGTTTTTCAGCACAAATTCCTCATCTCGAAAGAGGAAACTTCTAACAAGCGATTAA 2550 0.3639 MGGIGKTTLATALFNKISPQYDACCYIDDLSKIYFNFGATSAQKQLLCQALNQGNMEIHNVSRGTMLMKSRLCRLKTLLVLDNVDEVEHLEKLGLRPEYLGAGSRLIIISRDRCILQSYGVKEVYDVQLLDKIEALQLFCKKAFKSNDIGREHEELTLDVLQYANGLPLAIKVLGSLLHDRDVSEWRNALARMKENPSKHIMDVLRISYDALENLEKEIFLDIACFFSNRNNYSYETRVKRLLEYRQFYPDIGMKVLIEKSLISCQDGEIEMHDLLKELGKSIVREKAPKEPRKWNRLWNYKDLQKVMKINKETENVEAIVIHQSEKEFLEDVDALSKMNQLELLILENVNCSGTLDCISNELRYLQWNHFPLMSLPSNFHPDQLVELILPHSNIKKLWEGKKFLPNLTMLDMSHSKYLIAVPDLSEVPRLESLDLEGCIQLVEIHPSIGILRELRCLNLKNCKNLVLNLNMLFGISSLSGLYLSGCSKLLNSKMLMEPRDTKHLEEIVKITNAIQFPTSSVYKLLMLPFNFLYPPKPEDSLGLVLSLSSVPCLVYLDISFCNLLRIPDEIGNLHSLVGLNLGGNKFVTLPSTIKQLSNLERLYLEYCKQLKYLPELPTIKQKNIGGYYGLGLYIFDCTKLSDMEHCYSMVFSWMTQNLQVFFQPTISSARIEMEIVIPGSEIPKWFNKQSASTSISMDPSDVIDDPNWIGVAICVLFVTLQDPMNLGERDDDHLSNLWFGVNNSKRRWYIGVPIYFKKDLVTVGLDHLVTVFYSRQQFIHLLSTPPNTMHDLYQTEFGTFIHHPKGLRIVVKKCGYRWVFKEDLQQFNSNMFFSTNSSSRKRKLLTSD 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01131 849 Gene3D Ribonuclease Inhibitor 282 516 IPR032675 -
Viun11g01131 849 Gene3D Ribonuclease Inhibitor 517 660 IPR032675 -
Viun11g01131 849 PRINTS Disease resistance protein signature 403 419 - -
Viun11g01131 849 PRINTS Disease resistance protein signature 71 85 - -
Viun11g01131 849 PRINTS Disease resistance protein signature 164 178 - -
Viun11g01131 849 Pfam Leucine Rich Repeat 384 403 IPR011713 -
Viun11g01131 849 Gene3D - 130 213 IPR042197 -
Viun11g01131 849 Pfam Leucine rich repeat 554 608 IPR001611 GO:0005515
Viun11g01131 849 Pfam C-JID domain 678 825 IPR045344 -
Viun11g01131 849 SUPERFAMILY L domain-like 333 620 - -
Viun11g01131 849 SUPERFAMILY "Winged helix" DNA-binding domain 200 308 IPR036390 -
Viun11g01131 849 Pfam NB-ARC domain 1 203 IPR002182 GO:0043531
Viun11g01131 849 Gene3D - 1 123 IPR027417 -
Viun11g01131 849 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 493 IPR044974 GO:0006952
Viun11g01131 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01131 Viun-Chr11 24713000 24716099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01131 1 466 WRKY Transcription Factor Family AT5G45050 33.537 9.38e-70 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01131 - - vun:114169377 1666.36