Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01125 ATGGAGGAAGCCCAGAGATGGAGAGAAGCTCTCACAGAAGTGGCCAATCTCTCTGGTTGGGATGTCCGAAATAAGTCACAACATATCGTGATTGAAAAAATTGTTCAGGAGATATTAAGTATATTGAGTCCCAATTTTTCAAGTATTCCAAATGATCTAGTTGGGGTGGAATCTCCTCTCGAAGAACTACAACAACTTTTACTTTGCGACCCAGTTGATGATGTACGCATTGTAGGAATTTGTGGAATGGGTGGAATAGGAAAGACTACACTTGCTACTGTTCTATATGGTATAATCTCTCATCAATATAATGCTCGTTGTTTTATTGATGATGTAAACAAGATTTATAGAGATTGTGGAACAATTGGTGTAGTAAAGCAGCTCCTTCATCAAACTCTAAATGAAGAAAACCTTCAGATACACAATCTTTATAATGCAGCAAATTTGATGCGAAGAAGGTTTCGTTGTGTAAAGACTCTTATAGTTCTTGACCATGTTGATGAAGTTAAAGAACGAGAGAAATTAGTGGTGAATCGGGAATGGTTAGGAGAAGGAAGTAGAGTCATCATAATTTCCAGAGACAAGCATATCTTAAAAGAGTTTGGAGTGACGACAGTGTACGATGTTCAACTCTTGAATGATGCTAATTCTCTGAAGTTGTTTTGTAAAAAGGCTTTCAACAGTGATGAAATTGTAGGAGGTTACAAAGTCTTGACACATGCTGTGTTACAATATGCTAAGAGCCTACCACTAGCAATTAAAGTACTAGGCTCATTTTTGTTTGGTCGAAGGGTGTCAGAGTGGAGAAGTGCCTTGGTTAGGTTGAAAGAGAATCCCAACAAAGATATTTTGGATGTGCTTCAAATCAGTTACGATGGACTAGATGACTTGGAAAAGCAAATATTTCTGGACATTGCTTGTTTCTTCAGTGGGTATGAGGAGTTGTATGTGAAGAAAGTTCTTGATTGTCGTGGATTTCATCCTGAAATTGGAATCAGAGTCCTCCTTGACAAGTCACTCGTAAACAATTTCCATGGATTCATTAAAATGCATGATTTGTTGAAAGCTTTGGGCAGGAAAATTGTTCAAGGCAATTCACCCAAGGAGCCAGCAAAGTGGAGCAGGTTGTGGTTATATGAACATTTGTTTAGTATGTCCAAGGCAAAGGAAACAGCGAACACTGAAGCGATTGTTTTGGACATGTTAAGAGAGATAGAAGTATTGGCGACTGATGCTGAAGAGTTGTCCAAAATGAGTAACCTTCGGTTGCTTATACTCCATGATGTGAAGTTTATGGGAAACCTAAGTTTTCTGTCCAATAAACTGCAGTTTCTTGAGTGGTCTCACTATCCTTTCTCCTATTTACCATCAAGTTTTCAACCGAATTCACTTGTTGAATTGATCTTGCCACATGACAACATCAAACAACTATGGAAAGGCACAAAGTATCTGCCAAATCTAAGAGCTTTGGATCTCAGAGACTGCAAGAATCTTATTAAGATTCCAGACTTTACAGGGCTTCCAAATCTTGAGTGGATAATTCTTGACAGATGCACAAAACTTGTCTGCATCCATCCATCAGTTGGACTTCTAAGAAAGCTTGCTCTTTTGAGTTTGCAAAACTGCATAAATTTAGTGAGTCTACCAAGCAATATATTGGGTCTGAATTCTCTTGAATATCTGAATATCTCTGGCTGTTCAAGAGTATTTAGTAACCACCTTTTAGATAAACCCATACATGACCATTCAAAGATTCTTGATATCAGGGAAAATTCCATGCAATCCCAATCTACATCCTCTTCCATCATAAAGAAACTCATTGTTCCTTTCAATTTCTCGTACTACAGAGGGTTTAGAAATTCACGTGGCTGTTTGTTGCATTCCTTGCATAACTTCTTCTGTATGCATGACCTTAATATAAGTTTCTGCAATCTAGCACAAATCCCTGATGCTATTGGATCCATGCATTCCCTAGAAACCTTAAATTTGGGGGGAAACCACTTTGTTACCCTCCCTTCGAGCATCAACAAGCTTTCCAAACTCGTACATTTAAACTTGGAGCATTGCAAGCAATTAAGATTTTTCCCTGAGATGCCATCACCTACTGCTTTGCCTGTCACAAGAGAAACCTACAGTTTTGGTCGTTATGAAAGGGGATTACTTATTTTCAACTGTCCTAAAATAGTTGATATTGAAGGTTGTCAGAGAATGACTTTTGCATGGTTCTTACAAATCCTTCGGTTGAGCAAAGAATCGCGTACCCCTATTAATTTGATTGATATTGTTCTTCCTGGTAATCAGATTCCGAGATGGTTCAATCAGAGTCTTGGTACTTCAATTAGCTTAGACCCATCTCCCATTATGCATGACAATAACTGGATGGGCATTGCGTTCAGCTTGGTGTTTGTGGCATATGAAAACCAGTCTAATTTGGATCTCGATTTAGGATCCTATGTAGGCATTGGTTTTCACACGAACCCCTTTTTTTCCTCTATCGAAATGCCAGTACTTCTTACAGATTTGGTCACCGTCGGAATGCATCACTTGTGGCTACTCTTCTTGACCAGGGAAGAATTTTTTTCTTATTTTCAAATAGAAGGAACGCTTTATGTTAACGGCATGGAAATGCATACCACCGCCGGTGATTCTCAAGGTTTGCACATTGAGGTGATCAGTTGCGGATATCAATGGGTGTTTGAGAAGGATCTGGATAACCTAAACCCCACAAAAATTAGGAAAGAACACATCAACACTCATTTTGGCGATGAAGGAAATTCAATCCTTTCTTTAGTAGATGGACACTAG 2805 0.3872 MEEAQRWREALTEVANLSGWDVRNKSQHIVIEKIVQEILSILSPNFSSIPNDLVGVESPLEELQQLLLCDPVDDVRIVGICGMGGIGKTTLATVLYGIISHQYNARCFIDDVNKIYRDCGTIGVVKQLLHQTLNEENLQIHNLYNAANLMRRRFRCVKTLIVLDHVDEVKEREKLVVNREWLGEGSRVIIISRDKHILKEFGVTTVYDVQLLNDANSLKLFCKKAFNSDEIVGGYKVLTHAVLQYAKSLPLAIKVLGSFLFGRRVSEWRSALVRLKENPNKDILDVLQISYDGLDDLEKQIFLDIACFFSGYEELYVKKVLDCRGFHPEIGIRVLLDKSLVNNFHGFIKMHDLLKALGRKIVQGNSPKEPAKWSRLWLYEHLFSMSKAKETANTEAIVLDMLREIEVLATDAEELSKMSNLRLLILHDVKFMGNLSFLSNKLQFLEWSHYPFSYLPSSFQPNSLVELILPHDNIKQLWKGTKYLPNLRALDLRDCKNLIKIPDFTGLPNLEWIILDRCTKLVCIHPSVGLLRKLALLSLQNCINLVSLPSNILGLNSLEYLNISGCSRVFSNHLLDKPIHDHSKILDIRENSMQSQSTSSSIIKKLIVPFNFSYYRGFRNSRGCLLHSLHNFFCMHDLNISFCNLAQIPDAIGSMHSLETLNLGGNHFVTLPSSINKLSKLVHLNLEHCKQLRFFPEMPSPTALPVTRETYSFGRYERGLLIFNCPKIVDIEGCQRMTFAWFLQILRLSKESRTPINLIDIVLPGNQIPRWFNQSLGTSISLDPSPIMHDNNWMGIAFSLVFVAYENQSNLDLDLGSYVGIGFHTNPFFSSIEMPVLLTDLVTVGMHHLWLLFLTREEFFSYFQIEGTLYVNGMEMHTTAGDSQGLHIEVISCGYQWVFEKDLDNLNPTKIRKEHINTHFGDEGNSILSLVDGH 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01125 934 Gene3D Ribonuclease Inhibitor 618 783 IPR032675 -
Viun11g01125 934 Gene3D Ribonuclease Inhibitor 402 583 IPR032675 -
Viun11g01125 934 PRINTS Disease resistance protein signature 482 498 - -
Viun11g01125 934 PRINTS Disease resistance protein signature 77 92 - -
Viun11g01125 934 PRINTS Disease resistance protein signature 153 167 - -
Viun11g01125 934 PRINTS Disease resistance protein signature 246 260 - -
Viun11g01125 934 Gene3D - 44 207 IPR027417 -
Viun11g01125 934 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 708 IPR044974 GO:0006952
Viun11g01125 934 Pfam NB-ARC domain 57 281 IPR002182 GO:0043531
Viun11g01125 934 SUPERFAMILY L domain-like 406 704 - -
Viun11g01125 934 Gene3D - 1 43 IPR035897 -
Viun11g01125 934 Pfam Leucine rich repeat 637 690 IPR001611 GO:0005515
Viun11g01125 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 305 IPR027417 -
Viun11g01125 934 Gene3D - 211 295 IPR042197 -
Viun11g01125 934 SUPERFAMILY "Winged helix" DNA-binding domain 282 383 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01125 Viun-Chr11 24526291 24531555 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01125 1 684 WRKY Transcription Factor Family AT4G12020 32.539 8.11e-79 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01125 - - gmx:100820213 1332.01