Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01096 ATGGAGAGCTTCGAAATGTTTGGTGTGTGCCTTTTGTTCCTCTCTCTGTTATCCATGTCCTCCACTTTGGAGATGATTACTCCGACCCAACCCTTGAAAGATGGTGCGAATGAGAATGTAACTCTTGTCTCCACAAACGGAACCTTTGAAGCAGGATTCTTTAGCCCTGCAAATTCCGGTAGCCGTTACCTTGGAATTTGGTACAAAACCATATCCCCAAGAACAGTTGTTTGGGTGGCCAACAAAGAAACACCACTTCAAGACCACTCCGGAGTGTTAGAACTAGACCGTGATCAAGGAATTCTTAGCATCAAAAGTGGCACAGGAGCCAAAATATGGTCCTCAAATGCATCACACACTCGAAGCAAACCAGTTGCTGTCGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGCCACAATAACTTCTTATGGCAAAGCTTTGATTACCCAGATGATACTTTGCTTCCAGGAATGAAACTTGGAATGAACTTGAAAACTGGTCATTACCGAGCTTTAAGATCTTGGAAATCCCTCAACGATCCTACTCCAGGTGAATTTTCATTTGGTGTTGATACTCGTGGTCTTCCTCAACTAGTTATCACAAAGGATTCTAATGATAACATAGTTTTTAGACCAGGCTCTTGGAATGGTGTTAGAGTAACAGGAGTACCTGGACAAAGAACTCACCCATTAACCAAATCCCTTTTTGTTATGAATGAAGATGAAATCTATTATGAGATTCAACTCTTGAATAGTTCAACTAAACTGAGAAGCAGATTGGTCCCACAAGGATTGCAAATGCGTTTAATATGGTCAGATGAGAGTAAAATTTGGGATACTCCATACACGGGTTCATTTGATGAGTGTGAGAGATATGGTATGTGTGGTGCGAACACTATTTGTAATGTGAGTGGAGCAAATCAACACTGTGAATGTTTGAGTGGATTCCGATCGAACGTTGCAGATTCAACTTGTGAAAGAATTATACCTCTAGATTGCAACAAGGGAGATAGTTTTAAGAAGTACGAGGGAATGAAATTGCCAGACACATCTTCATCTTGGTATGATAAGAGAATGAGTCTTGAGGAGTGCCAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCCTATGCTCAATTGGATATGAGTGCCAACGGAAGTGGCTGCTTGCAATGGTTTAATGACATTGTTGACTTCAGGATACTTGCACAGGATGGACAAGATTTTTATCTGCGAATTACAGCTTCAAAATTGCAAGATCACGCCTTCAACAGTAAGATAGGAGGAATTATACTTGGCTGCACTGTATTCATCATTGCCATTGTAGTATTTGGGTCCATACTTTGCCTTAAGAGGAATAAACTCAAGCAAACAGATCTGATACAATTTCAAGTAGCAGAAACAAATTACTGGAAGGACAAGAATAAGAAGGATGACATTGATTTACCAATATTCGACTTTTTATACATCTCCAATGCCACAAATAACTTTTCTGAGAGTAATAAATTGGGACAAGGGGGATTTGGACCGGTGTACAAGGGAATATTACCAGATGGACAAGAAATTGCAGTTAAGAGGCTTTCTAAAACTTCGGGACAAGGTTTGGATGAGTTCAAGAATGAAGTATTGCTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCACCAAGATGAAAGACTACTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATTTTTGATTCAACAAGAAGTACATCAATAGATTGGGCTAAGAGATTTGAAATTATTGATGGAATTGCTAGAGGACTTCTCTATCTTCATCAAGATTCTAGACTAAATATCATTCATAGAGATCTCAAGACTAGTAATGTTCTTCTTGATAGCAATATGAAACCAAAAATATCAGATTTTGGTATTGCTAGGACATTTAACCAAGATCAAGATGAAGCTAACACAAATAAAGTGATGGGAACATATGGTTATATGCCTCCCGAATATGCTGTGCATGGATCATTTTCAGTCAAATCAGATGTATTCAGTTTTGGGGTAATTGTATTAGAGATAATCACTGGAAGGAAGAATAGAGGATTTCGTGACCCACACAATGAGCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCAATGGAATTAATGGGTGAGTCAATGGATACCGGAGATGATCCATCTGAAATATTAAGATATATTCATATTGGTTTGTTGTGCGTACAATATAGACCAGAGGATAGGTCAAACATGTCTTCAGTTGTTTTAGTGTTGAACAGTGAAAAGTTATTGCCTGAGCCAAGTCAACCTGGATTTTACCCAGGAAGAAATAATTTGACAACCATGACAGATTCTTCTTCAAGAAATTTGGATGCGTATTCTCTCAACGAAATGTCTGAGACATTGCTTGAGGCAAGATAG 2457 0.3862 MESFEMFGVCLLFLSLLSMSSTLEMITPTQPLKDGANENVTLVSTNGTFEAGFFSPANSGSRYLGIWYKTISPRTVVWVANKETPLQDHSGVLELDRDQGILSIKSGTGAKIWSSNASHTRSKPVAVELLESGNMVVKDGHNNFLWQSFDYPDDTLLPGMKLGMNLKTGHYRALRSWKSLNDPTPGEFSFGVDTRGLPQLVITKDSNDNIVFRPGSWNGVRVTGVPGQRTHPLTKSLFVMNEDEIYYEIQLLNSSTKLRSRLVPQGLQMRLIWSDESKIWDTPYTGSFDECERYGMCGANTICNVSGANQHCECLSGFRSNVADSTCERIIPLDCNKGDSFKKYEGMKLPDTSSSWYDKRMSLEECQKLCLSNCSCTAYAQLDMSANGSGCLQWFNDIVDFRILAQDGQDFYLRITASKLQDHAFNSKIGGIILGCTVFIIAIVVFGSILCLKRNKLKQTDLIQFQVAETNYWKDKNKKDDIDLPIFDFLYISNATNNFSESNKLGQGGFGPVYKGILPDGQEIAVKRLSKTSGQGLDEFKNEVLLIAKLQHRNLVKLLGCSIHQDERLLIYEFMPNRSLDYFIFDSTRSTSIDWAKRFEIIDGIARGLLYLHQDSRLNIIHRDLKTSNVLLDSNMKPKISDFGIARTFNQDQDEANTNKVMGTYGYMPPEYAVHGSFSVKSDVFSFGVIVLEIITGRKNRGFRDPHNELNLLGHAWRLWIEKRPMELMGESMDTGDDPSEILRYIHIGLLCVQYRPEDRSNMSSVVLVLNSEKLLPEPSQPGFYPGRNNLTTMTDSSSRNLDAYSLNEMSETLLEAR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01096 818 ProSitePatterns EGF-like domain signature 2. 312 327 IPR000742 -
Viun11g01096 818 Gene3D Transferase(Phosphotransferase) domain 1 575 777 - -
Viun11g01096 818 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Viun11g01096 818 PIRSF SRK 2 818 IPR024171 GO:0004674
Viun11g01096 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 464 574 - -
Viun11g01096 818 SMART ntp_6 336 415 IPR003609 -
Viun11g01096 818 SMART serkin_6 499 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01096 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Viun11g01096 818 Gene3D - 19 149 IPR036426 -
Viun11g01096 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 183 IPR036426 -
Viun11g01096 818 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Viun11g01096 818 Pfam D-mannose binding lectin 75 178 IPR001480 -
Viun11g01096 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Viun11g01096 818 Gene3D Phosphorylase Kinase; domain 1 461 574 - -
Viun11g01096 818 CDD PAN_AP_plant 332 415 - -
Viun11g01096 818 Pfam PAN-like domain 335 400 IPR003609 -
Viun11g01096 818 Gene3D Hepatocyte Growth Factor 332 415 - -
Viun11g01096 818 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01096 818 ProSiteProfiles EGF-like domain profile. 287 328 IPR000742 -
Viun11g01096 818 SMART blect_4 33 152 IPR001480 -
Viun11g01096 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 757 - -
Viun11g01096 818 SUPERFAMILY Protein kinase-like (PK-like) 484 804 IPR011009 -
Viun11g01096 818 CDD STKc_IRAK 505 771 - -
Viun11g01096 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 149 - -
Viun11g01096 818 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Viun11g01096 818 ProSiteProfiles PAN/Apple domain profile. 335 416 IPR003609 -
Viun11g01096 818 CDD B_lectin 29 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01096 Viun-Chr11 23665751 23670049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01096 415 784 Receptor kinase-like Gene Family AT4G23230 49.865 1.97e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g01096 PK_Tyr_Ser-Thr 5.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01096 - - vum:124820888 1417.52