Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01086 ATGATAAAAATCGTACCAAAATCAATGGAGAGCTTCGAAATGTTTGGTGTGTGCCTTTTGTTCCTCTCTCTGTTATCCATGTCCTCCACTTTGGAGATGATTACTCCCACCCAACCCTTGAAAGATGGTACGAATGAGAATGTAACTCTTGTCTCCACAAACGGAACCTTTGAAGCAGGATTCTTCAGCCCTTCAAATTCCGGTAGCCGTTACCTTGGAATTTGGTACAAAACCATATCCCCAAGAACAGTTGTTTGGGTGGCCAACAAAGAAACACCACTTCAAGACCACTCCGGCGTCTTAGAACTAGACAGTGATCAAGGAATTCTTAGTATCAAAAGTGGCACAGGAGCCAAAATATGGTCCTCAAATGCATCACACACTCCAAGCAAACCAGTTGCTGTGGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGCCACAATAACTTCTTATGGCAAAGCTTTGATTACCCAGATGATACTTTGCTTCCAGGAATGAAACTTGGAATAAACTTGAAAACTGGTCATTACCGAGCTTTAAGATCTTGGAAATCCCTCAACGATCCTACTCCAGGTGAATTTTCATTTGGTGTTGATACTCGTGGCCTTCCTCAACTAGTTATCACAAAGGATTCTAATGATGACATAGTTTATAGACCAGGCTCTTGGAATGGTGTTGGAGTCACAGGAGTACCTGGACAAAGAACTACTCATCCTTTAACAAAATCCCTTTTTGTTATGAATGAAGATGAAATCTTTTATGAGATTCAACTCTTGAATAGTTCAACTAAACTGAGAAGCAGATTGCTCCCAGAAGGGTATCAAATGCGTTTATTATGGTCAGATGAGAGTAAAAGTTGGGATCCTCTATACACTGGTTCATTTGATGAGTGTGAGAAATATGGTATGTGTGGTGCGAACACTATTTGCAATGTGAGTGGAGCACATCAACACTGTGAATGTTTGAGTGGATTCCGATCGAACGTTGCAGATTCAACTTGTGATCGAATTATACCTCTAGATTGCAACAAGGGAGATAGTTTTAAGAAGTACGAGGGAATGAAATTGCCAGACACATCTTCATCTTGGTATGATAAGAGAATGAGTCTTGATGAGTGCCAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCCTATGCTCAATTGGATATCAGTGCCAACGGAAGTGGCTGCTTGCAATGGTTTCATAACATTGTTGACTTCAGGATACTAGCACAGGATGGACAGGATTTTTATCTGCGAATTGGAGCTTCAAAATTCCAAGATCACGCCTTCAACAGGAAGATAGGAGGAATTATACTTGGTTGCACTATATTCATCATCGCCATTGTAGTATTTGGGTCCATATTTTGCCTCAACAGGAATAAACTCAAGCAAGCAGATCTGATACAATTTCAAGTAGCAGAAACAAATTACTGGAAGGACAAGAATAAGAAGGATGACATTGATTTACCAATATTCGACTTTTTATACATCTCCAATGCCACAAATAACTTTTCTGAAAGTAACAAATTGGGACAAGGGGGATTTGGACCGGTGTACAAGGGAATATTACCAGATGGGCAAGAAATTGCAGTTAAGAGGCTTTCTAAAACTTCGGGACAAGGTTTAGATGAGTTCAAGAATGAAGTATTGTTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAGCAAGATGAAAGACTGCTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATTTTTGATTCCGCAAGAAGTTCATCAATAGATTGGGCAAAGAGATTTGAAATTATTGATGGAATTGCTAGAGGACTTCTCTATCTTCATCAAGATTCTAGACTAAAAATCATTCATAGAGATCTCAAGACTTGTAATATTCTTCTTGACAACAATATGAAACCAAAAATATCAGATTTTGGTATGGCTAGGGCATTTAACCTAGATCAAGATGAAGCAAACACAAATAAAGTGATGGGAACATATGGTTATATGCCTCCCGAATATGCTGTGCATGGATCATTTTCAATTAAATCAGATGTATTTAGTTTTGGGGTAATTGTACTGGAGATAATCAGTGGAAGGAAGAATAGAGGATTTCGTGACCCACACAATGAGCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCAATGGAACTAATGGATGAGTTAGTTGACACTGGAGATGGTCCATCTGAAATATTAAGATATATTCATATTGGTTTGTTGTGCGTACAACAGAGACCAGAGGATAGGCCAAACATGTCTTCAGTAGTTTTAATGTTGAATGGCGAAAAGTTATTGCCTGAGCCAAGTCAACCTGGATTTTACACGGGAAGAAATAACTTGACAACCATGACAGATTCTTCTTCAAGAAATGTGGATGTGTATTCTCTCAACGAAATGTCTGAGACATTGCTTGAGGCAAGATAA 2484 0.3881 MIKIVPKSMESFEMFGVCLLFLSLLSMSSTLEMITPTQPLKDGTNENVTLVSTNGTFEAGFFSPSNSGSRYLGIWYKTISPRTVVWVANKETPLQDHSGVLELDSDQGILSIKSGTGAKIWSSNASHTPSKPVAVELLESGNMVVKDGHNNFLWQSFDYPDDTLLPGMKLGINLKTGHYRALRSWKSLNDPTPGEFSFGVDTRGLPQLVITKDSNDDIVYRPGSWNGVGVTGVPGQRTTHPLTKSLFVMNEDEIFYEIQLLNSSTKLRSRLLPEGYQMRLLWSDESKSWDPLYTGSFDECEKYGMCGANTICNVSGAHQHCECLSGFRSNVADSTCDRIIPLDCNKGDSFKKYEGMKLPDTSSSWYDKRMSLDECQKLCLSNCSCTAYAQLDISANGSGCLQWFHNIVDFRILAQDGQDFYLRIGASKFQDHAFNRKIGGIILGCTIFIIAIVVFGSIFCLNRNKLKQADLIQFQVAETNYWKDKNKKDDIDLPIFDFLYISNATNNFSESNKLGQGGFGPVYKGILPDGQEIAVKRLSKTSGQGLDEFKNEVLLIAKLQHRNLVKLLGCSIQQDERLLIYEFMPNRSLDYFIFDSARSSSIDWAKRFEIIDGIARGLLYLHQDSRLKIIHRDLKTCNILLDNNMKPKISDFGMARAFNLDQDEANTNKVMGTYGYMPPEYAVHGSFSIKSDVFSFGVIVLEIISGRKNRGFRDPHNELNLLGHAWRLWIEKRPMELMDELVDTGDGPSEILRYIHIGLLCVQQRPEDRPNMSSVVLMLNGEKLLPEPSQPGFYTGRNNLTTMTDSSSRNVDVYSLNEMSETLLEAR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01086 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 766 - -
Viun11g01086 827 Gene3D - 27 157 IPR036426 -
Viun11g01086 827 Gene3D Phosphorylase Kinase; domain 1 481 583 - -
Viun11g01086 827 Pfam D-mannose binding lectin 83 186 IPR001480 -
Viun11g01086 827 Pfam Protein tyrosine and serine/threonine kinase 511 777 IPR001245 GO:0004672|GO:0006468
Viun11g01086 827 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01086 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 473 583 - -
Viun11g01086 827 CDD B_lectin 37 160 IPR001480 -
Viun11g01086 827 SMART blect_4 41 160 IPR001480 -
Viun11g01086 827 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Viun11g01086 827 CDD PAN_AP_plant 341 424 - -
Viun11g01086 827 Pfam PAN-like domain 344 409 IPR003609 -
Viun11g01086 827 Gene3D Transferase(Phosphotransferase) domain 1 584 785 - -
Viun11g01086 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Viun11g01086 827 CDD STKc_IRAK 514 781 - -
Viun11g01086 827 SMART serkin_6 508 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g01086 827 SMART ntp_6 345 424 IPR003609 -
Viun11g01086 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 157 - -
Viun11g01086 827 ProSiteProfiles Bulb-type lectin domain profile. 35 158 IPR001480 -
Viun11g01086 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 191 IPR036426 -
Viun11g01086 827 ProSitePatterns EGF-like domain signature 2. 321 336 IPR000742 -
Viun11g01086 827 SUPERFAMILY Protein kinase-like (PK-like) 493 815 IPR011009 -
Viun11g01086 827 Gene3D Hepatocyte Growth Factor 341 422 - -
Viun11g01086 827 PIRSF SRK 5 827 IPR024171 GO:0004674
Viun11g01086 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Viun11g01086 827 Pfam S-locus glycoprotein domain 220 329 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01086 Viun-Chr11 23557490 23573026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01086 496 793 Receptor kinase-like Gene Family AT4G23230 58.863 5.88e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g01086 PK_Tyr_Ser-Thr 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01086 - - vum:124820888 1447.18