Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01085 ATGTGCAAAATAAGGAGTAGAATCATCATAATTTCTAGAAATTGTCATATCTTACAAAATTATGGAGTAAATGAAGTTTACAAAGTTCAAGTCTTAGATGATACTCAATCTCTTCAATTACTTTGCAAGAAAGCTTTCAAATCGAATGATATTGGGGAAGAATATAAAGAGTTGACATTAGATATATTGAAGTATGTGAATGGTCTTCCATTAGCTCTTGAAGTATTGGGCTCATTTTTACTTGATCGAGATGTTTGTGAATGGAGATATGCATTAACTAGAATGGAAGAAAATCCAAGCAAAGATATCATGGATGTGTTGCGAATAAGTTTTGATGGATTGGAGAATCTAGAGAAAGAAATATTTCTAGATATTGCTTGTTTCTTCTCCAATAAGACTCACCATTCTTCGCAGCAAACAATGAAAAAACTTCTGCACTATCGACAATTTTATCCTGACATTGGTATGAAAGTTCTGATTGAGAAATCACTCATAAGTTGTCAAGATGGATATATTGGAATGCATGACTTGTTGAAAGAGTTGGGTAAGAGTATTGTCCGAGAAAAAGCACCCAAAGAACCAAGAAAGTGGAGCAGGTTATGGAACTACAAGGATCTCCAGAAGGTCATGAAAATAAACAAGGAAGCAAAAAATGTTGAAGCTATAATTATTAAACAATATCCAAAAGAGTTTCTAAAAGCAATAAGAGTGGATGCTCTCTCAAAAATGAATCAGCTTGAGTTGCTGATTCTTAAGAATGTGCAGTGTTTTGGAACTCTGGATTGCATTTCTAATGAACTGAGATATCTAAAGTGGAATCACTTTCCTTGTATGTCTTTCCCGTCAACTTTTCATCCAGATCAACTTGTAGAACTCATTCTGCGTCATAGCAATATCAAGCAATTATGGGAAGGCAAAAAGTGTCTGCCTAATTTGAGAAATATGGATCTGAGTCATTCCAAAAATCTTATTGAGGTGCCAGACTTAAGTGAGGCTCCACGTCTTAAGAATATTAATCTTGGAGGATGTATACAACTAGTCCAGATCCATCCGTCCATTGGTATTCTAAGAGAACTTCAACATTTGTATTTAAATAATTGCAAAAACCTTGTCCTTAATCTCATTATTCTTTTTGGGATCAGTTCTCTTAAGACCTTAGATCTTTCCGGTTGTTCAAAATTACTTAATAGTAAGATGTTAATGGAGCCAAGAGACACAAAACATTTGGAGGAAGTTGTTAAAAATAGAAATATCATCCAATTGCCAACATCCTCTGTATACGAATTTCTAATGTTGCCTTTCAAATTTTTCTACCCTCCAAAAGCTGAAGCTTCACTTGGTTTGGTATTCTCTTCTTTGTCTTCTGTCCCATGTCTGGAATATCTTGATATAAGCTTCGGCAATCTACTTCAAATTCCAGATGGAATTGGGAACTTACGTTCTTTAAGAGGATTAAATTTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATTAAGAAACTTTCCAATCTTCAACATTTGAACTTGGAACACTGCAAGGAGATGAAATATTTACCTGAGCTTCCAACGATGAAAGAAGAAACAATTGATGGATACTACGGACAATTATTAATTTTTTATTGTCCCAAGTTTAGAGATATGGAACACTGTTATAGCACGGTTTTTTCTTGGATGACGCAAAATCTTCAGGTTTACTTGCAACCTAGAATGGAAATTGTTATTCCTGGAAGTGAAATCCCAAAGTGGTTCAATAAACAAAATGCAAGTACATCAATAATTATGGACCCATATGATGTTATAGATGACCCAAATTGGATTGGAGTTGCCATTTGTGCTCTATTTGTCACACACCAAGATCCTATGAATTTAGGTGAAATATATGATTTTCTCAATACTATTGCATACGGTGTCAATAATATCAATGGTTGTGGAAAATATTATCAATCAATTCCAATACATTTGACTACAGATCTGGTGACGGTTGAATTAAATCACTTGTTTATAGTGTTTTACTCTCAACAGGGATTGACTAGTCTTCTAAGCAGCCGTTCAAATACCATGCATGATCTTCATGGAATTGAATTTGGAACTTGGATTCGAAGTCCTAAAGGTTTACGTGTTGTGGTTAAGAATTGCGGATATCGTTGGGTATTCAAGAAGGATCTTCAACCATTAAACTCAACCATGTTTTTCAGCGGAAATTCTTCATCTCGAAAGAGGAAGTTTCTAACAAGTGACTAA 2244 0.3471 MCKIRSRIIIISRNCHILQNYGVNEVYKVQVLDDTQSLQLLCKKAFKSNDIGEEYKELTLDILKYVNGLPLALEVLGSFLLDRDVCEWRYALTRMEENPSKDIMDVLRISFDGLENLEKEIFLDIACFFSNKTHHSSQQTMKKLLHYRQFYPDIGMKVLIEKSLISCQDGYIGMHDLLKELGKSIVREKAPKEPRKWSRLWNYKDLQKVMKINKEAKNVEAIIIKQYPKEFLKAIRVDALSKMNQLELLILKNVQCFGTLDCISNELRYLKWNHFPCMSFPSTFHPDQLVELILRHSNIKQLWEGKKCLPNLRNMDLSHSKNLIEVPDLSEAPRLKNINLGGCIQLVQIHPSIGILRELQHLYLNNCKNLVLNLIILFGISSLKTLDLSGCSKLLNSKMLMEPRDTKHLEEVVKNRNIIQLPTSSVYEFLMLPFKFFYPPKAEASLGLVFSSLSSVPCLEYLDISFGNLLQIPDGIGNLRSLRGLNLGGNKFVTLPSTIKKLSNLQHLNLEHCKEMKYLPELPTMKEETIDGYYGQLLIFYCPKFRDMEHCYSTVFSWMTQNLQVYLQPRMEIVIPGSEIPKWFNKQNASTSIIMDPYDVIDDPNWIGVAICALFVTHQDPMNLGEIYDFLNTIAYGVNNINGCGKYYQSIPIHLTTDLVTVELNHLFIVFYSQQGLTSLLSSRSNTMHDLHGIEFGTWIRSPKGLRVVVKNCGYRWVFKKDLQPLNSTMFFSGNSSSRKRKFLTSD 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01085 747 Gene3D Ribonuclease Inhibitor 443 531 IPR032675 -
Viun11g01085 747 Gene3D Ribonuclease Inhibitor 167 428 IPR032675 -
Viun11g01085 747 Pfam Leucine rich repeat 459 514 IPR001611 GO:0005515
Viun11g01085 747 Pfam C-JID domain 575 723 IPR045344 -
Viun11g01085 747 SUPERFAMILY L domain-like 231 682 - -
Viun11g01085 747 SUPERFAMILY "Winged helix" DNA-binding domain 102 210 IPR036390 -
Viun11g01085 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 125 IPR027417 -
Viun11g01085 747 PRINTS Disease resistance protein signature 378 394 - -
Viun11g01085 747 PRINTS Disease resistance protein signature 66 80 - -
Viun11g01085 747 Gene3D - 31 115 IPR042197 -
Viun11g01085 747 Pfam Leucine Rich Repeat 288 307 IPR011713 -
Viun11g01085 747 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 397 IPR044974 GO:0006952
Viun11g01085 747 Pfam NB-ARC domain 4 101 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01085 Viun-Chr11 23474816 23478582 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01085 5 523 WRKY Transcription Factor Family AT5G45050 28.257 5.30e-48 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01085 - - vun:114168792 1495.33