Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01080 ATGTGCAAAATAAGGAGTAGAATCATCATAATTTCTAGAAATTGTCATATCTTACAAAATTATGGAGTAAATGAAGTTTACAAAGTTCAAGTCTTAGATGATACTCAATCTCTTCAATTACTTTGCAAGAAAGCTTTCAAATCGAATGATATTGGGGAAGAATATAAAGAGTTGACATTAGATATATTGAAGTATGTGAATGGTCTTCCATTAGCTCTTGAAGTATTGGGCTCATTTTTACTTGATCGAGATGTTTGTGAATGGAGATATGCATTAACTAGAATGGAAGAAAATCCAAGCAAAGATATCATGGATGTGTTGCGAATAAGTTTTGATGGATTGGAGAATCTAGAGAAAGAAATATTTCTAGATATTGCTTGTTTCTTCTCCAATAAGACTCACCATTCTTCGCAGCAAACAATGAAAAAACTTCTGCACTATCGACAATTTTATCCTGACATTGGTATGAAAGTTCTGATTGAGAAATCACTCATAAGTTGTCAAGATGGATATATTGGAATGCATGACTTGTTGAAAGAGTTGGGTAAGAGTATTGTCCGAGAAAAAGCACCCAAAGAACCAAGAAAGTGGAGCAGGTTATGGAACTACAAGGATCTCCAGAAGGTCATGAAAATAAACAAGGAAGCAAAAAATGTTGAAGCTATAATTATTAAACAATATCCAAAAGAGTTTCTAAAAGCAATAAGAGTGGATGCTCTCTCAAAAATGAATCAGCTTGAGTTGCTGATTCTTAAGAATGTGCAGTGTTTTGGAACTCTGGATTGCATTTCTAATGAACTGAGATATCTAAAGTGGAATCACTTTCCTTGTATGTCTTTCCCGTCAACTTTTCATCCAGATCAACTTGTAGAACTCATTCTGCGTCATAGCAATATCAAGCAATTATGGGAAGGCAAAAAGTGTCTGCCTAATTTGAGAAATATGGATCTGAGTCATTCCAAAAATCTTATTGAGGTGCCAGACTTAAGTGAGGCTCCACGTCTTAAGAATATTAATCTTGGAGGATGTATACAACTAGTCCAGATCCATCCGTCCATTGGTATTCTAAGAGAACTTCAACATTTGTATTTAAATAATTGCAAAAACCTTGTCCTTAATCTCATTATTCTTTTTGGGATCAGTTCTCTTAAGACCTTAGATCTTTCCGGTTGTTCAAAATTACTTAATAGTAAGATGTTAATGGAGCCAAGAGACACAAAACATTTGGAGGAAGTTGTTAAAAATAGAAATATCATCCAATTGCCAACATCCTCTGTATACGAATTTCTAATGTTGCCTTTCAAATTTTTCTACCCTCCAAAAGCTGAAGCTTCACTTGGTTTGGTATTCTCTTCTTTGTCTTCTGTCCCATGTCTGGAATATCTTGATATAAGCTTCGGCAATCTACTTCAAATTCCAGATGGAATTGGGAACTTACGTTCTTTAAGAGGATTAAATTTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATTAAGAAACTTTCCAATCTTCAACATTTGAACTTGGAACACTGCAAGGAGATGAAATATTTACCTGAGCTTCCAACGATGAAAGAAGAAACAATTGATGGATACTACGGACAATTATTAATTTTTTATTGTCCCAAGTTTAGAGATATGGAACACTGTTATAGCACGGTTTTTTCTTGGATGACGCAAAATCTTCAGGGATTGACTAGTCTTCTAAGCAGCCGTTCAAATACCATGCATGATCTTCATGGAATTGAATTTGGAACTTGGATTCGAAGTCCTAAAGGTTTACGTGTTGTGGTTAAGAATTGCGGATATCGTTGGGTATTCAAGAAGGATCTTCAACCATTAAACTCAACCATGTTTTTCAGCGGAAATTCTTCATCTCGAAAGAGGAAGTTTCTAACAAGTGACTAA 1911 0.3501 MCKIRSRIIIISRNCHILQNYGVNEVYKVQVLDDTQSLQLLCKKAFKSNDIGEEYKELTLDILKYVNGLPLALEVLGSFLLDRDVCEWRYALTRMEENPSKDIMDVLRISFDGLENLEKEIFLDIACFFSNKTHHSSQQTMKKLLHYRQFYPDIGMKVLIEKSLISCQDGYIGMHDLLKELGKSIVREKAPKEPRKWSRLWNYKDLQKVMKINKEAKNVEAIIIKQYPKEFLKAIRVDALSKMNQLELLILKNVQCFGTLDCISNELRYLKWNHFPCMSFPSTFHPDQLVELILRHSNIKQLWEGKKCLPNLRNMDLSHSKNLIEVPDLSEAPRLKNINLGGCIQLVQIHPSIGILRELQHLYLNNCKNLVLNLIILFGISSLKTLDLSGCSKLLNSKMLMEPRDTKHLEEVVKNRNIIQLPTSSVYEFLMLPFKFFYPPKAEASLGLVFSSLSSVPCLEYLDISFGNLLQIPDGIGNLRSLRGLNLGGNKFVTLPSTIKKLSNLQHLNLEHCKEMKYLPELPTMKEETIDGYYGQLLIFYCPKFRDMEHCYSTVFSWMTQNLQGLTSLLSSRSNTMHDLHGIEFGTWIRSPKGLRVVVKNCGYRWVFKKDLQPLNSTMFFSGNSSSRKRKFLTSD 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01080 636 PRINTS Disease resistance protein signature 378 394 - -
Viun11g01080 636 PRINTS Disease resistance protein signature 66 80 - -
Viun11g01080 636 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 397 IPR044974 GO:0006952
Viun11g01080 636 Gene3D Ribonuclease Inhibitor 166 428 IPR032675 -
Viun11g01080 636 Gene3D Ribonuclease Inhibitor 443 588 IPR032675 -
Viun11g01080 636 Pfam Leucine Rich Repeat 288 307 IPR011713 -
Viun11g01080 636 SUPERFAMILY "Winged helix" DNA-binding domain 102 210 IPR036390 -
Viun11g01080 636 Gene3D - 31 115 IPR042197 -
Viun11g01080 636 Pfam NB-ARC domain 4 101 IPR002182 GO:0043531
Viun11g01080 636 Pfam Leucine rich repeat 459 514 IPR001611 GO:0005515
Viun11g01080 636 SUPERFAMILY L domain-like 232 523 - -
Viun11g01080 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 125 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01080 Viun-Chr11 23468171 23478582 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01080 5 523 WRKY Transcription Factor Family AT5G45050 28.257 1.56e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01080 - - vun:114168792 1117.83