Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01078 ATGGATTACTTACAAGAAACCAACGCAATAGGTTTGGAGGACATCAATTTATTAGAAGAAGATGGGGATAGTGGAACTATCTTCGACGAGGAAGGCATTGATAAGGAAGACAACGAAAAGCACTCTGAGGATGTCGTTTCTCCGTGTGTTGGGATGTATTTTGATAGTGTTGACAACGTCAAGAAATTTTACAAAGAATACGCTATTAGAAGTGGTTTCAGAACAAGAATCAGAACTTCGACAAAAGACGATGACAATCAATTATGTTACTTCAAATTAGTGTGTTCGCGGGAGGGAAAGTGTGTGTCCTCCATACCACCTGAAATGAAGACACTGCCCACACAAAGAAAACAATGTCCTACGTGCATTACTGTGGTTAGAAGAAAAGATAAGTGGATGATTAACAGTGTGGTCCATGAACACAATCATGACGTAAGTCCATCCAAGTCAAGACTAATTCGTGGGAATAGGAAGTTGAATATGCAAGCCAAAAGAACCCTTGACATAAATGACGAAGCAGGTGTGCGTATTCACAAGAGCTTTCGTTCTTTAGTGTGTGATGCAGGGGGGTTTGAGAACTTATATTTTGTCGAAAGAGATGCAAGAAACTATATTGGTCAACAACGACGCGCTTTAGAGAAGGAAGGTGACAGACAAGCTTTATTAAACCACTTTTTCAGTATGAAGGAGTTGAACAAAGACTTCTTTTTTGAAATTGACGTTGATGTAGATAATCGCATAACCAATATATTTTGGGCAGATGGAAGGAGTCAGGCTGCATGTGCAGATTTTGGTGACATTGTGTCCTTCGACACCACATACTTAACTAATAAGTACGATATGCCTTTTGCACCATTTGTGGGTGTTAATCACCATGGATATACCAAATACAAGGAAATCAAGCATGGTGTAAAACAATTGGTATATGAGTCAGATAATGCTGAAGATTTTGAGAATGGGTGGGCAAAATTCATTGAAAAGTATGATCTTCAACTTAATGAATGA 1005 0.3871 MDYLQETNAIGLEDINLLEEDGDSGTIFDEEGIDKEDNEKHSEDVVSPCVGMYFDSVDNVKKFYKEYAIRSGFRTRIRTSTKDDDNQLCYFKLVCSREGKCVSSIPPEMKTLPTQRKQCPTCITVVRRKDKWMINSVVHEHNHDVSPSKSRLIRGNRKLNMQAKRTLDINDEAGVRIHKSFRSLVCDAGGFENLYFVERDARNYIGQQRRALEKEGDRQALLNHFFSMKELNKDFFFEIDVDVDNRITNIFWADGRSQAACADFGDIVSFDTTYLTNKYDMPFAPFVGVNHHGYTKYKEIKHGVKQLVYESDNAEDFENGWAKFIEKYDLQLNE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01078 334 PANTHER OS01G0519700 PROTEIN 42 272 - -
Viun11g01078 334 Pfam FAR1 DNA-binding domain 62 146 IPR004330 -
Viun11g01078 334 Pfam MULE transposase domain 267 295 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01078 Viun-Chr11 23459664 23460893 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun11g01078 FAR1 6.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01078 - - vun:114190181 570.852