LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun11g01076	ATGAAGAAACTTCTAGACTATCGACAATTTTATCCTGACATTGGTATGAAAGTTTTGATTGAGAAATCACTCATAAGTTGTACACGTCAGTATATTCAAATGCACGACTTGTTGAGAGAGTTGGGTAAGAGTATTGTCCGAGAAAAATCACCCAAAGAACCAAGAAAGTGGAACAGGTTGTGGAGCTACAAGGATCTCCAAAAGGTCATGAAAGTAAATAAGGAATCCGAAAATGTTGAAGCTATAGTTATTGATCAACATCCAGACGAGTTTCTACTAAGTAGATTAAGAGTGGATGCTCTCTCAAAAATGAATCACCTTGAGTTGCTCGTTCTAAACAATGTGAACTGTTTTGGAACTCTCAATTATATATCTAATGAACTGAAATATCTATATTGGAGTAACTTTTCTTGGATGTCTTTGCCATCAACTTTCCATCTAGATCAACTTGTAGAATTGATCCTGCCTCATAGCAATATCAAAAAATTATGGGAAGGCAAAAAGTGTTTGCCTAATTTGAAAACGTTGGATCTCAGTCACTCCAGAAATCTTGTTGGGTTGCCAAACTTTAGTGAGATTCCACATCTTACGAAACTTATTCTTGAAGGATGTATACAAATAATGCAGATTGATCCATCTATTGATATTCTAAAAGAACTTGATCATTTGAATTTGAGGAATTGTAAAAATCTCGTTCTTAATCTGAATATCCTTTTTGGGATTAGTTCTCTTGGGAGCTTAAATGTCTCTGGCTGTTCAAAATTACTTAATAGTAAGATGTTAATGGAGCCAAGGAACACAGAGCATTTGGAGAAAGCTGATAAAAATAAAAATATTATCCAATTGCCAACATCCTCTGTATACAAACTTCTAATGTTGCCTTTCCATTTTTTCTACCCTTTGGAAGCTGAAGATTCACTTGGTCTGTTAATGTCTTCTTTTTCTTTTTCTGCCCCGTGTTTGTTTGAACTTGATATAAGCTTCTGCGGTCTACTTCGAATCCCAGATGAAATTGGGAACTTACGTAGTTTGGCAAAACTAAAGTTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATCAAGCAACTTTCAAATCTTCAAAGTTTCAACTTAGAACACTGCAAACAGCTGAAATATTTGCCTGAGCTTCCAACAATAACAGGAAAAAATGGCAGATACCCTATGGGATTATACGTTTTTGATTGCCCCAAGTTGAGTGATATGGAACACTGTTATAGCATGGTTTTTCCTTGGATGACACAAACTCTTAAGGTTTACTTGCAACCTACTGTTTCGCCAGCTAGGATGGAAATTGTTACTCCTGGAAGTCAAATTCCAAAGTGGTTCAACAAACAGTATTCAACAAGATCAGTAAGAATGGACCCATCTGCTATTATAGATGACCCAAATTGGATAGGTGTTGCCATTTGCGTTCTATTTGTCACACACCAAGATCCTATGAATTTGGGTGAAATATATGGTCATCCTTACCGTGGTATTGAATACGGTTTCAATAATGTCTTTCATTTGTCAAAATATTATTTAGTAGTTCCAATACATTTCAAGAATGATTTGGTGACAATTGGATTAGATCACTTGTTGACAGTCTTTTGCTGTCGGCAAGAATTCATTCATCTTCTAGGCAGACATCCAAATACCATGCATGATCTTCACAGCATTGAATTCGAAACTTCGATTCGAAGTCCTAAAGGTTTACGTGTTGTGGTGAAGAATTGCGGGTATCGTTGGGTATTTCAGGAGGATCTTCAACAACTAAACTCAAACATGTTTTTCGGCGAAAATTCCTCATATCGAACGAGGAAGCTTCTAACAATTGATTAA	1845	0.3626	MKKLLDYRQFYPDIGMKVLIEKSLISCTRQYIQMHDLLRELGKSIVREKSPKEPRKWNRLWSYKDLQKVMKVNKESENVEAIVIDQHPDEFLLSRLRVDALSKMNHLELLVLNNVNCFGTLNYISNELKYLYWSNFSWMSLPSTFHLDQLVELILPHSNIKKLWEGKKCLPNLKTLDLSHSRNLVGLPNFSEIPHLTKLILEGCIQIMQIDPSIDILKELDHLNLRNCKNLVLNLNILFGISSLGSLNVSGCSKLLNSKMLMEPRNTEHLEKADKNKNIIQLPTSSVYKLLMLPFHFFYPLEAEDSLGLLMSSFSFSAPCLFELDISFCGLLRIPDEIGNLRSLAKLKLGGNKFVTLPSTIKQLSNLQSFNLEHCKQLKYLPELPTITGKNGRYPMGLYVFDCPKLSDMEHCYSMVFPWMTQTLKVYLQPTVSPARMEIVTPGSQIPKWFNKQYSTRSVRMDPSAIIDDPNWIGVAICVLFVTHQDPMNLGEIYGHPYRGIEYGFNNVFHLSKYYLVVPIHFKNDLVTIGLDHLLTVFCCRQEFIHLLGRHPNTMHDLHSIEFETSIRSPKGLRVVVKNCGYRWVFQEDLQQLNSNMFFGENSSYRTRKLLTID	614

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun11g01076	614	Pfam	C-JID domain	442	590	IPR045344	-
	Viun11g01076	614	SUPERFAMILY	L domain-like	33	383	-	-
	Viun11g01076	614	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	281	384	IPR044974	GO:0006952
	Viun11g01076	614	Pfam	Leucine Rich Repeat	149	168	IPR011713	-
	Viun11g01076	614	Gene3D	Ribonuclease Inhibitor	45	269	IPR032675	-
	Viun11g01076	614	Gene3D	Ribonuclease Inhibitor	270	424	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun11g01076	Viun-Chr11	23444347	23446866	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun11g01076	4	367	WRKY Transcription Factor Family	AT4G12020	31.008	5.11e-30	124

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun11g01076	-		-	pvu:PHAVU_011G1362001	870.922