Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01053 ATGCCTTCTAAGGCCATCATTCAATGCAGTTCTTCTTCATCATCTCAAGTCACAAGAACGTATGATGTGTTTGTGAGTTTCCGAGGTGAAGACACTCGAAACAACTTTACTGATTTTCTCTTCCAGGCTCTTCGTAGAAAAGGTTTTGATGCCTTCAAAGACGATGCGGATCTCAGGAAAGGTGAATCCATAGCACCGGAACTGCAACAAGCCATTGAAGGGTCTCGCGTTTTCATCGTGGTCTTCTCTAAGAACTATGCTTCCTCAACTTGGTGCTTGCGTGAACTTGCACACATTTGCTATTTGGTTGAAACACCGGGAAGACATGTTCTACCTATTTTTTATGATGTGGATCCGTCAGATGTGCGAAAACAGAGTGGCTATTACGAGAAACCCTTTGTCGAATTCGAAGAAAGATTTAGAGAAGATAATGAATGGATGGAGGAAGTACAGAGATGGAGAGAAGCTCTCACACAAGTTGCCAATCTCAGTGGCTGGGACATTAGAAATAGGCCACAATATGAAGGGATTGAAGTAATTGTTCGAAAGGTGACAGATATATTGGGTCATAAATTTTCAAGTCTTCCGAATGATAATCTAGTTGGGATGGAATTTCGTGTTGAGGAATTAGAAAAACTCTTATATTCGGAGTCAAGTAATGAAGTTAGAGTTTTTGGAATCAGTGGAATGGGTGGAGTAGGAAAGACAACTCTTGTTCGTGCTTTATACGAAAGAATCTGTCATCAATATGATTTTACTTGTTATATCGATGATGTGAACCAGATATATGGAGATTCTAGTACATTAGGTGTACAAAAGCAATTGCTTTCTTGTTCTCTAAATGAAAAATATGAAGAGATTTGCAATGTTTCTGAGGGAACTTATTTGATATGGAAAAGGCTACATCGTAAAAAGGCACTCATAGTTCTCGATAATGTTGATGAAGTTGAACAGCTAAAGGTTTTTAGTGGGAATCGAGACACTATGTTACGTGATTGCCTAGGTAGAGGGAGCATAATCATCATAATTTCTAGAGATGAACAAATATTGAGGATACATGGAGTAGATGAGGTTCGCCATGTTCAACCACTAGAGGAAGAAGAGGCCGTTCAATTATTTTGTAGACATGCTTTCAAAGCTAATGTTATTATGAGTGATTTTGAAAAGATGACATATGAGGTACTGTGGCATGCTCAAGGCCATCCTTTAGCAATTGAAATATTGGGTTCAACATTATTTGGTCTAAGTGTATCACAATGGAGAAGTGCATTAGCTATGCTAAGAGAAAATAAAAGTAAAAAGATTATGGATGTGCTGAGAATAAGTTTTGAAGCATTGGATTCTACAAACAAGGAAATATTTCTAGACATTTCTTGCTTTCTCCATAATTATATAATGGATCATGCAGTAGAAATTCTAAATATTCGTGGATTTTATCCCGACTTTGGCTTGCAAGTTCTCATAAATAAATCACTCTTGATCGTTAAGCATGGGATAATTAAAATGCATCGGTTGTTGATCGATTTGGGCCAGTCTATTGTTCGTGAAATATCACCTAAAGAGCCAAGAAATTGGAGCAGAGTGTGGAGCTGCAAGGATCTACAAAAAATACTGTCCAATAACATGCCAGCAGAAAATCTTGAAGCCGTAGTTTTTAATCAGTTTGAATTCCGTAAAAGAACCTTGAGCGCCGATGCGTTTTCAAACCTGAGTCATCTTAAGTTGCTCAAGATCAATGGTCCATATTTTTCCGGAAGCCTGGACTATCTTCCTAGTGAATTAGGATATCTATATTGGAATCGATATCCTTTTAAGTCTTTGCCACCTCGTTTTCTACCATACAAGCTTGTTTCGTTGTCCCTGACTTATAGCAATATCGAGCGACTATGGGAAGATACAAAGCCTTTACACAGTTTGAAGCATTTGGATCTCTCATATTCAGAAAAACTAATAAAGTTGCCAGATTTAGGGGAGGCCATAAATCTTGAGCGGCTATGTCTGAGATATTGCACAAAAATAAGGGAGATCCATCCATCCATTGGTCTCCTAAGAAAACTTTCTAATGTGACCTTGGAAGGCTGCGAAAATCTTATAAAGTTGCCACATTTTGAAGAGACCCAAAATCTTGAAATACTAAATCTTGAGAGATGTATAAAACTGGAGAAGCTCCATCCATCCATTGGTCATATAAGAAAACTGAAATCTTTGTACTTAAGACACTGCGAAAGTCTTACAATGTTGCCAGATTTTGGAGAGGACCTAAATCTTGAAAGACTATATCTCGATCGATGTATAAAGCTCAGGCATATCAATCCCTCCATTCATCGTCTAAAAAAGCTTACTATTTTGTGTTTGGCAGGCTGCAAAAGGCTAGTAAGCTTGCCCATCACAATATTATGCCTCAATTCTCTCAGTGATCTGTATGTCTCGACCTGTTCAAATCTGTCTTATATCCAATTATTAGAAGAAGCAAGGGATGAAGGTCATTTGAAGAGGCCTTGTGTAGGTGAAGCTTCTGTAAGATCATCTATCATGAAAAGGTGGTTTAAGTGGCCTTTACACTTGTTGCATTCAAGAACACATAAAGATTCAGCTAGCCACTTGTTGCCTTCTCCCAATTTCTCATGCATTCGTGTACTTCAACTAAGTTTCTGTGCTTTACTTGAAATCCCTGATGTTGTTGGAAGTTTGCACAGCTTAGAAAGGCTAAAGTTAAGTGGAAACAGTTTTTCTAAACTACCAAGCCTCAAAGAGCTTTCCAAACTGCATTATTTAGTCTTAAGGCATTGCAAGCAACTGAAATATTTGCCTGAGCTCCCTTCACAAACGTACTTGCCATCGCCAACTACAGAATTTCCAGTATGTACAGACACGAAAGATAAAGAAATAGATCTACATTTTGTAAATTCAGTATTAGATGCTTTGAACTGCCCAAAATTAGATGAGATTGAAAGGGAACGCTGCACTAAAATGGCTGTTTCATGGATGATACAAATACTACAGGCACAATACCGCAGAGATCCGTTGTCCATAACGAATAAATATTTTTCAAGTCTTACTCCTGGAAGTGAAATACCAAGGTTGTTCAACCATCAGTATAAGTCTAGCTATGTAAGTAGCATTGACGCATCTCCCTATCGGAATGACTATGTGGCTGCTGTGTTTTGTGTATTATTCGAAGCTCGATGCAAAAGGGGTATTGTGTCACCAATGTGTCCTCAGAAAGCAAAAGGAGGCAGTAAGATTCCAATGCTTCTTGATGATGATCTAGCCGTCATGGACAATTGTTCAGATTACTTGTGGATGACCTTTTTGAATAAATATGAATTCCTTGAATATCAGCACTCACGTTTGTATAATAATATATCAGAAGTAGTCGGGGATGGTTTTCATATTTCCGTGAAGAAATGGGGGTATCGTCTGATATATGATCTCGATCTAGAATTATCTATTTTAGCAAGGATGCATGGTGGAAGTTAG 3480 0.381 MPSKAIIQCSSSSSSQVTRTYDVFVSFRGEDTRNNFTDFLFQALRRKGFDAFKDDADLRKGESIAPELQQAIEGSRVFIVVFSKNYASSTWCLRELAHICYLVETPGRHVLPIFYDVDPSDVRKQSGYYEKPFVEFEERFREDNEWMEEVQRWREALTQVANLSGWDIRNRPQYEGIEVIVRKVTDILGHKFSSLPNDNLVGMEFRVEELEKLLYSESSNEVRVFGISGMGGVGKTTLVRALYERICHQYDFTCYIDDVNQIYGDSSTLGVQKQLLSCSLNEKYEEICNVSEGTYLIWKRLHRKKALIVLDNVDEVEQLKVFSGNRDTMLRDCLGRGSIIIIISRDEQILRIHGVDEVRHVQPLEEEEAVQLFCRHAFKANVIMSDFEKMTYEVLWHAQGHPLAIEILGSTLFGLSVSQWRSALAMLRENKSKKIMDVLRISFEALDSTNKEIFLDISCFLHNYIMDHAVEILNIRGFYPDFGLQVLINKSLLIVKHGIIKMHRLLIDLGQSIVREISPKEPRNWSRVWSCKDLQKILSNNMPAENLEAVVFNQFEFRKRTLSADAFSNLSHLKLLKINGPYFSGSLDYLPSELGYLYWNRYPFKSLPPRFLPYKLVSLSLTYSNIERLWEDTKPLHSLKHLDLSYSEKLIKLPDLGEAINLERLCLRYCTKIREIHPSIGLLRKLSNVTLEGCENLIKLPHFEETQNLEILNLERCIKLEKLHPSIGHIRKLKSLYLRHCESLTMLPDFGEDLNLERLYLDRCIKLRHINPSIHRLKKLTILCLAGCKRLVSLPITILCLNSLSDLYVSTCSNLSYIQLLEEARDEGHLKRPCVGEASVRSSIMKRWFKWPLHLLHSRTHKDSASHLLPSPNFSCIRVLQLSFCALLEIPDVVGSLHSLERLKLSGNSFSKLPSLKELSKLHYLVLRHCKQLKYLPELPSQTYLPSPTTEFPVCTDTKDKEIDLHFVNSVLDALNCPKLDEIERERCTKMAVSWMIQILQAQYRRDPLSITNKYFSSLTPGSEIPRLFNHQYKSSYVSSIDASPYRNDYVAAVFCVLFEARCKRGIVSPMCPQKAKGGSKIPMLLDDDLAVMDNCSDYLWMTFLNKYEFLEYQHSRLYNNISEVVGDGFHISVKKWGYRLIYDLDLELSILARMHGGS 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01053 1159 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 744 IPR044974 GO:0006952
Viun11g01053 1159 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 457 IPR027417 -
Viun11g01053 1159 SMART till_3 20 163 IPR000157 GO:0007165
Viun11g01053 1159 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 166 IPR035897 -
Viun11g01053 1159 PRINTS Disease resistance protein signature 300 314 - -
Viun11g01053 1159 PRINTS Disease resistance protein signature 398 412 - -
Viun11g01053 1159 PRINTS Disease resistance protein signature 224 239 - -
Viun11g01053 1159 PRINTS Disease resistance protein signature 634 650 - -
Viun11g01053 1159 ProSiteProfiles TIR domain profile. 19 188 IPR000157 GO:0007165
Viun11g01053 1159 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 190 - -
Viun11g01053 1159 ProSiteProfiles Leucine-rich repeat profile. 899 920 IPR001611 GO:0005515
Viun11g01053 1159 SUPERFAMILY L domain-like 558 817 - -
Viun11g01053 1159 Gene3D Ribonuclease Inhibitor 529 702 IPR032675 -
Viun11g01053 1159 Gene3D - 18 191 IPR035897 -
Viun11g01053 1159 SUPERFAMILY "Winged helix" DNA-binding domain 433 538 IPR036390 -
Viun11g01053 1159 Pfam TIR domain 21 184 IPR000157 GO:0007165
Viun11g01053 1159 Gene3D - 192 357 IPR027417 -
Viun11g01053 1159 Gene3D - 363 447 IPR042197 -
Viun11g01053 1159 Pfam Leucine Rich Repeat 615 634 IPR011713 -
Viun11g01053 1159 Gene3D Ribonuclease Inhibitor 703 827 IPR032675 -
Viun11g01053 1159 Gene3D Ribonuclease Inhibitor 852 999 IPR032675 -
Viun11g01053 1159 Pfam NB-ARC domain 206 433 IPR002182 GO:0043531
Viun11g01053 1159 SUPERFAMILY L domain-like 872 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01053 Viun-Chr11 22916449 22923419 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01053 18 823 WRKY Transcription Factor Family AT4G12020 28.263 1.41e-79 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01053 - - vra:106756186 1811.96