Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01024 ATGGACTTGAATGAGTTTTCAAGTGTCGGTGTGACTAGTTCTGCAGGAATCCCTTGCACATCATCTTATACTCATATTTCAGCAATACCCAACAGGTTGATTGGATCCTTGAAACACGACACAGAACACTCTCCTAATTCGGCTCTTTCTACCCATTTTGATTCTGATACCCTTTCTTCTGCACTAAGTGACGGCCAGGAACAGCACACCGCTGGGGAAATTCACTCTGGTGTAAACCCTTTGCAACTATCTACTAGATGCTTTTTTCCACAGGATATAAGTTATGACCATGAAACCAGATATGCATTGCTGGAATTAGAAACTGCTTTGATGGCACCTGATGGTGATGATCAAGTCACCACATCAAGCACTTCGTCTTTTGGTGTTAGCAGAAGGCCTACAACATCTGGGCAGAGAAATAGGTCCTGGAGCCATGAGGGTCAGCCAAATGATGTTGCACGAGTGGGTAAGCGTCACAAATCAACTGAGGAAGTATCACTACAAGGATTTCCATCAACCCATTTGAAAGAATTGCTGATTGTGTCAGCCAAAGCCTTGTCTGAAAACAAGATGAAAGATTTTGATCAATTGATAGAGAAGGCTAGAAGTGTTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTCGGTGCTTATTTGGTGGAAGGGCTTGTTGCAAGGAAGGAGGCATCGGGGAATAACATCTACCGTGCACTCAGATGCAGAGAACCTGAAGGAAAAGACTTGCTCTCTTACATTCAGCTACTGTATGAAATATGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGCGCCATTGCTGAAGCTTGTAGAGATGAGGACCACATTCATATCATAGACTTTCAGATTGGTCAAGGAATTCAATGGATGACACTTCTTCAAGCTCTTGCTGCAAGACCTGGTGGAGCTCCCCATGTGCGGATCACAGGGATTGATGACCCCCTTTCTAAATATGTCCGTGGTGATGGATTAGAAGCCGTTGGAAAAAGGTTGGCTGAAATATCTCAGACATTTAACATCCCAGTTGAGTTCCACAGTGTGCCTGTTTTAGCTCCATATGTGACAAAAGACATGCTTGACATTAGACCTGGTGAGGCTTTGGCTGTGAATTTCCCTTTGCAACTCCATCACACGGCTGATGAGAGTGTCGACATGAGTAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACGTTGATTGAGCAAGAGTCAAACACTAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTGGCAATTTTTGAGTCCATTGATGTGTCTCTTGCAAGAAAGAGCAAGGATCGGATTAATGTAGAACAACATTGTCTGGCACGGGATATTGTCAATATTGTTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACATGAACTGTTAGGCAAGTGGAAGTCTAGGTTCACAATGGCTGGCTTTTCTCAATATCCTTTGAGTTCATACGTTAATTCTGTCATAAGGAGCCTGCTTAGGTGCTACTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGTTGGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCATGGCACTGA 1638 0.4353 MDLNEFSSVGVTSSAGIPCTSSYTHISAIPNRLIGSLKHDTEHSPNSALSTHFDSDTLSSALSDGQEQHTAGEIHSGVNPLQLSTRCFFPQDISYDHETRYALLELETALMAPDGDDQVTTSSTSSFGVSRRPTTSGQRNRSWSHEGQPNDVARVGKRHKSTEEVSLQGFPSTHLKELLIVSAKALSENKMKDFDQLIEKARSVVSITGEPIQRLGAYLVEGLVARKEASGNNIYRALRCREPEGKDLLSYIQLLYEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIGQGIQWMTLLQALAARPGGAPHVRITGIDDPLSKYVRGDGLEAVGKRLAEISQTFNIPVEFHSVPVLAPYVTKDMLDIRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLIEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLARKSKDRINVEQHCLARDIVNIVACEGKERVERHELLGKWKSRFTMAGFSQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKDRNLISASAWH 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01024 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 136 541 IPR005202 -
Viun11g01024 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Viun11g01024 545 MobiDBLite consensus disorder prediction 114 166 - -
Viun11g01024 545 Pfam GRAS domain family 175 544 IPR005202 -
Viun11g01024 545 MobiDBLite consensus disorder prediction 40 77 - -
Viun11g01024 545 MobiDBLite consensus disorder prediction 37 77 - -
Viun11g01024 545 MobiDBLite consensus disorder prediction 115 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01024 Viun-Chr11 21666751 21669880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01024 97 544 GRAS Transcription Factor Family AT5G48150 56.347 3.05e-175 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun11g01024 GRAS 6.5e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01024 - - gmx:100775665 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01024 11 21666751 21669880 Viun11g01024 11 21666751 21669880 ECH