Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01022 ATGGATGTTGCAGAGGCCTTAAATTTGGAAGGGATAAATCTTCACGGATGCATACAACTTCGAAATATCAATCCATCAATTGGTCTTTTGAGAAAGCTTGTTTTTCTATTTTTGGTGGACTGCAAAAGCCTAGTAAGCTTACCCAATACTATATTGGGCTTGAGTTCTCTCAAATATCTGAATGTCTCTGGCTGTACAAAACTTTATAAAAATGTGTTGCTAGATGAAGCAAGGAACAGAGAGCATTTGAAGAAGCTTCGTTTACTTGAATCTCCTATTCAATTCCAGTCAACATTGTCTCTCCTAAAAAATATGTTTCTGTGGCCTTTAGATTTGTTGTATCCGAAAGCACAGAGAGACTCGATCAGCTGTTTGTTGCCCTCCTCTCCCACTCTCCCTTGTTTGCGTCTCCTTAATCTAAGTTTCTGTAACTTAGTTCAAATCCCTGACGCCATTGCAGAGTTACGGTGCTTAGAAAAGTTAAATTTAAAGGGAAACAATTTTGTTACGTTGCCTAACCTCAAAGACCTTTCCAGACTGTATTATTTAGACTTACAGCATTGCAAGCAATTCAAATACTTGCCTGACCTCCCTTCACGAACTCACTTACCCTCAAAATTTTACATGCGGCCATTCCTACGTTTAAAAGTTCGGTCGGATTCACTATTTGGTTGGCTGAACGACCATCATTATGAGGCAGGATTAATCATTTTCAACTGCCCAGAATTAGTTGAGAGGGAACGGTGCATTAGCATGAGTGTTTCATGGATGATGCAAATTTTTCAGGCGACCCAGCAATGCAAATGTCTTGATGCATCCATTCTATTAGCTACAAATATTCAAAGTATTATTCCTGAAAGTGAAATACCGAGGTGGTTCAACAATCAGTTTGTGAGCATGGACAATTCAATAATCATTGATCCATCTCCCGTTACGCATGACAATAATTGGATTGGTGTTGTGTGCTGTGCAATATTTCGTCTAGGCAATGAGTATGATGTGCGTTTTCCAAACCCAACATATCTTCAATTTCCACGCATTCCAAAATTTCCCGTGGATTTGAGAAAAGATCCAGTCATTGACCAGTCAGATCACATGAAGCTATTTTATTTCCGTCGGCAAGATTTCACTCGACCATGTTGGGTCGGATCTGATACTCGTAAATTTATTAGTTTGAAATTGAGGATGGAGGACATACAAATATTTCATCACGACAGACTTGGTTACCAGAAATTTGTTACGGTGGATGTGAAAAAATATGGGTATCGATGGGTATATGAGGAAGATCAACAACCAAACTTTACATTGATGTATGGCAAAAATTTGACTGATCTGAAGCGCAAGTTTTCAGTAATTGAAGAAAACAGGTAG 1371 0.3873 MDVAEALNLEGINLHGCIQLRNINPSIGLLRKLVFLFLVDCKSLVSLPNTILGLSSLKYLNVSGCTKLYKNVLLDEARNREHLKKLRLLESPIQFQSTLSLLKNMFLWPLDLLYPKAQRDSISCLLPSSPTLPCLRLLNLSFCNLVQIPDAIAELRCLEKLNLKGNNFVTLPNLKDLSRLYYLDLQHCKQFKYLPDLPSRTHLPSKFYMRPFLRLKVRSDSLFGWLNDHHYEAGLIIFNCPELVERERCISMSVSWMMQIFQATQQCKCLDASILLATNIQSIIPESEIPRWFNNQFVSMDNSIIIDPSPVTHDNNWIGVVCCAIFRLGNEYDVRFPNPTYLQFPRIPKFPVDLRKDPVIDQSDHMKLFYFRRQDFTRPCWVGSDTRKFISLKLRMEDIQIFHHDRLGYQKFVTVDVKKYGYRWVYEEDQQPNFTLMYGKNLTDLKRKFSVIEENR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01022 456 Gene3D Ribonuclease Inhibitor 112 211 IPR032675 -
Viun11g01022 456 SUPERFAMILY L domain-like 7 200 - -
Viun11g01022 456 Gene3D Ribonuclease Inhibitor 3 91 IPR032675 -
Viun11g01022 456 ProSiteProfiles Leucine-rich repeat profile. 157 178 IPR001611 GO:0005515
Viun11g01022 456 PANTHER LEUCINE-RICH REPEAT-CONTAINING 8 272 - -
Viun11g01022 456 Pfam C-JID domain 284 430 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01022 Viun-Chr11 21663824 21665816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01022 3 206 WRKY Transcription Factor Family AT4G12020 31.754 7.72e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01022 - - vun:114169934 936.021