Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00990 ATGAAGTTTATTCTTGTTACTCTCACGAGTCTCCTGCTTATACCGTTTATCCCTTCTGTTGTTTCCACAGTACAAGACACGTCATCTATTTCTCAGTCCCAGTCCCTCAGTTATGGAAACACCATAGTTTCTCGCCCACTCGGAACCTTTGAGCTTGGTTTCTTCAATCTTGGAAATCCCAACAAGATCTACCTCGGGATTTGGTATAAGAATATTCCGATTCAAAACGTTGTTTGGATTGCAAACGGTGCCAATCCTATCAATGAATCCTCTGCCATCTTGAAACTAAATAGTTCTGGCAACTTGGTCATTTCCCACAACAACATCGATGTTTGGTACACTAGTTCTGCAAACGATGCACAGAATCCAGTAGCAGTACTTTTGGATTCTGGTAATCTTGTAATAAGAGATCAGAGTGCAGCAAATACAGAGGAATACTTGTGGCAAAGTTTTGATTACCCTTCTAATACAATGGTTGCTGGAATGAAGATTGGATGGGACATCAAAAGAAATTTTAGTATTCGTATCGTATCTTGGAAGAGTTATGATGATCCAACACCAGGAGATTTGTCATGGGGCATTAAACTATATCCTTATCCTGATACCTATATCATGAAGGGAACCAAAAAGTTCTGCAGAACTGGACCATGGAATGGATTGCGCTTCAGTGGCCGGCCAAATCTGAGGCCTAATAAGGTTTACAATTATGAGTTTGTGTCCAACAAGGAAGAGGTTTATTACACATGGACACTGGTGAATACTAGTTTAACAACAATTGTGGTCCTTAACCAAACCTCGGAAGAGCGTCCTCGTTATGTGTGGTTAGAGGATACTAAATCATGGTCACCTTATTTAACCATACCAGCGGAGCTCTGTGACCATTATGGCGTATGTGGAGCCAATGCATATTGCGCCCCTTCTGCATCACCAATGTGTGAATGTTTGAAAGGGTTCGAGCCTAAGTCTCGAGAAAACTGGAGCACAACGGACTGGTCTCAAGGATGTGTCCTTAAACATGCTTTGAATTGCAAGAATGATGGGTTTGTCCCTGTCGAAGGCTTGAAAGTTCCGGATACTGAACATACCTCTGTGGATCAGAGTATTGATCTAGCGCAATGCAGAAGCAAGTGCTTGAATGATTGTTCCTGCATGGCATATACAAATTATAATATTAGTGGATCAGGAAGTGGTTGTGTGATGTGGTTTGGTGATCTAATTGACATCATACAGTATTCAAATGCTACATATGGGCAGGCTTTATATATCCGGCTGCCAAAATCAGAATTAGAAGATGCTATCAACAGGCGGAGGAAGTCCACAATAAAACTTGTAACCAGCATCCCTGTGGCTTCAGGGATGCTTTTACTTGGTATTTATTTCATCTGCAGATTCCGGAGGAAGAAGAACGAGAAGTCAGAAAATATCTTTGAATCATGTGTGGATGATTTGGATCTACCATTGTTTGATTTGTCAACAATTACAGCTGCTACTGATAATTTCTCAGAGATGAATCGGATTGGAGAAGGTGGTTTTGGACCTGTATATTGGGGAAAATTATTCAGTGGACTAGAAATTGCTGTAAAGAGACTTTCACAAAATTCAGGACAAGGAATAACCGAGTTTGTAAATGAAGTTAAACTGATTGCAAAACTTCAGCACAGGAATCTTGTAAAACTTTTAGGCTGTTGCATTCAAAACCAAGAAAAAATATTGGTTTATGAATATATGTCCAACGGCAGCCTAGATTACTTCATTTTTGATCACACAAAAGGTAAACTACTTGACTGGAAAAAGCGTTTCCACATAATTTGTGGACTTGCAAGAGGACTTATGTATCTTCATGAAGATTCTCGACTAAGGATTGTCCATAGAGACCTCAAAGGGAGTAATGTTCTTCTAGATGAAGATTTCAATCCAAAAATATCAGATTTTGGATTGGCTAAAACTGTTGGAAAAGAGGAGATTGAAGGAAACACAAATATGATAGTTGGAACATTTGGGTACATGGCACCCGAATATGCTATTGATGGTCAGTTTTCTATAAAATCTGATGTATTCAGCTTTGGTGTTATATTGTTGGAGATAATATGTGGGAGGAAAAATAGAGGATCATATCATGGAAAGCAATATAACCTTGTTGATCATGCATGGACATTGTGGAAATTTGGAAAGACTTCAGAAATAATTGACCCAAACATTGAGAGTTCATGCATTGAATCTGAATTGTTACGTTGCATCCATATTGGGCTATTGTGTGTTCAACAATACCCAGAGGATAGGCCTACAATGAGTTCAGTGGTTTTAATGTTGGGAAGTGAGATGGATTTGGATGAACCAAAAAGGCCGGGGATTTTCAATAAGAAGGAATCTATTGAAGCAAGTTCAAGCTCAAGTAGTTCAACCAATGCCCTAACCATAACCCTAAAGGCTCGGTGA 2436 0.3941 MKFILVTLTSLLLIPFIPSVVSTVQDTSSISQSQSLSYGNTIVSRPLGTFELGFFNLGNPNKIYLGIWYKNIPIQNVVWIANGANPINESSAILKLNSSGNLVISHNNIDVWYTSSANDAQNPVAVLLDSGNLVIRDQSAANTEEYLWQSFDYPSNTMVAGMKIGWDIKRNFSIRIVSWKSYDDPTPGDLSWGIKLYPYPDTYIMKGTKKFCRTGPWNGLRFSGRPNLRPNKVYNYEFVSNKEEVYYTWTLVNTSLTTIVVLNQTSEERPRYVWLEDTKSWSPYLTIPAELCDHYGVCGANAYCAPSASPMCECLKGFEPKSRENWSTTDWSQGCVLKHALNCKNDGFVPVEGLKVPDTEHTSVDQSIDLAQCRSKCLNDCSCMAYTNYNISGSGSGCVMWFGDLIDIIQYSNATYGQALYIRLPKSELEDAINRRRKSTIKLVTSIPVASGMLLLGIYFICRFRRKKNEKSENIFESCVDDLDLPLFDLSTITAATDNFSEMNRIGEGGFGPVYWGKLFSGLEIAVKRLSQNSGQGITEFVNEVKLIAKLQHRNLVKLLGCCIQNQEKILVYEYMSNGSLDYFIFDHTKGKLLDWKKRFHIICGLARGLMYLHEDSRLRIVHRDLKGSNVLLDEDFNPKISDFGLAKTVGKEEIEGNTNMIVGTFGYMAPEYAIDGQFSIKSDVFSFGVILLEIICGRKNRGSYHGKQYNLVDHAWTLWKFGKTSEIIDPNIESSCIESELLRCIHIGLLCVQQYPEDRPTMSSVVLMLGSEMDLDEPKRPGIFNKKESIEASSSSSSSTNALTITLKAR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00990 811 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Viun11g00990 811 SUPERFAMILY Protein kinase-like (PK-like) 485 772 IPR011009 -
Viun11g00990 811 Pfam D-mannose binding lectin 77 180 IPR001480 -
Viun11g00990 811 MobiDBLite consensus disorder prediction 789 811 - -
Viun11g00990 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 151 - -
Viun11g00990 811 SMART blect_4 33 154 IPR001480 -
Viun11g00990 811 Pfam Protein tyrosine and serine/threonine kinase 503 768 IPR001245 GO:0004672|GO:0006468
Viun11g00990 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 778 - -
Viun11g00990 811 CDD STKc_IRAK 506 770 - -
Viun11g00990 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 761 - -
Viun11g00990 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Viun11g00990 811 ProSiteProfiles Protein kinase domain profile. 500 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00990 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Viun11g00990 811 SMART serkin_6 500 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00990 811 Pfam PAN-like domain 343 408 IPR003609 -
Viun11g00990 811 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Viun11g00990 811 Gene3D - 21 151 IPR036426 -
Viun11g00990 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Viun11g00990 811 FunFam receptor-like serine/threonine-protein kinase SD1-8 469 575 - -
Viun11g00990 811 Gene3D Phosphorylase Kinase; domain 1 476 575 - -
Viun11g00990 811 CDD PAN_AP_plant 341 425 - -
Viun11g00990 811 SMART ntp_6 343 424 IPR003609 -
Viun11g00990 811 Gene3D Transferase(Phosphotransferase) domain 1 576 786 - -
Viun11g00990 811 CDD B_lectin 39 154 IPR001480 -
Viun11g00990 811 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00990 Viun-Chr11 20167509 20171335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00990 441 800 Receptor kinase-like Gene Family AT4G23190 49.727 5.78e-123 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00990 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00990 - - gmx:100808807 1237.25