Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00989 ATGAAGTTTATTCTTGTTACTCTCACGAGTCTCCTGCTTATACCGTTTATCCCTTCTGTTGTTTCCACAGTACAAGACACGTCATCTATTTCTCAGTCCCAGTCCCTCAGTTATGGAAACACCATAGTTTCTCGCCCACTCGGAACCTTTGAGCTTGGTTTCTTCAATCTTGGAAATCCCAACAAGATCTACCTCGGGATTTGGTATAAGAATATTCCGATTCAAAACGTTGTTTGGATTGCAAACGGTGCCAATCCTATCAATGAATCCTCTGCCATCTTGAAACTAAATAGTTCTGGCAACTTGGTCATTTCCCACAACAACATCGATGTTTGGTACACTAGTTCTGCAAACGATGCACAGAATCCAGTAGCAGTACTTTTGGATTCTGGTAATCTTGTAATAAGAGATCAGAGTGCAGCAAATACAGAGGAATACTTGTGGCAAAGTTTTGATTACCCTTCTAATACAATGGTTGCTGGAATGAAGATTGGATGGGACATCAAAAGAAATTTTAGTATTCGTATCGTATCTTGGAAGAGTTATGATGATCCAACACCAGGAGATTTGTCATGGGGCATTAAACTATATCCTTATCCTGATACCTATATCATGAAGGGAACCAAAAAGTTCTGCAGAACTGGACCATGGAATGGATTGCGCTTCAGTGGCCGGCCAAATCTGAGGCCTAATAAGGTTTACAATTATGAGTTTGTGTCCAACAAGGAAGAGGTTTATTACACATGGACACTGGTGAATACTAGTTTAACAACAATTGTGGTCCTTAACCAAACCTCGGAAGAGCGTCCTCGTTATGTGTGGTTAGAGGATACTAAATCATGGTCACCTTATTTAACCATACCAGCGGAGCTCTGTGACCATTATGGCGTATGTGGAGCCAATGCATATTGCGCCCCTTCTGCATCACCAATGTGTGAATGTTTGAAAGGGTTCGAGCCTAAGTCTCGAGAAAACTGGAGCACAACGGACTGGTCTCAAGGATGTGTCCTTAAACATGCTTTGAATTGCAAGAATGATGGGTTTGTCCCTGTCGAAGGCTTGAAAGTTCCGGATACTGAACATACCTCTGTGGATCAGAGTATTGATCTAGCGCAATGCAGAAGCAAGTGCTTGAATGATTGTTCCTGCATGGCATATACAAATTATAATATTAGTGGATCAGGAAGTGGTTGTGTGATGTGGTTTGGTGATCTAATTGACATCATACAGTATTCAAATGCTACATATGGGCAGGCTTTATATATCCGGCTGCCAAAATCAGAATTAGAAGATGCTATCAACAGGCGGAGGAAGTCCACAATAAAACTTGTAACCAGCATCCCTGTGGCTTCAGGGATGCTTTTACTTGGTATTTATTTCATCTGCAGATTCCGGAGGAAGAAGAACGCTGCTACTGATAATTTCTCAGAGATGAATCGGATTGGAGAAGGTGGTTTTGGACCTGTATATTGGGGAAAATTATTCAGTGGACTAGAAATTGCTGTAAAGAGACTTTCACAAAATTCAGGACAAGGAATAACCGAGTTTGTAAATGAAGTTAAACTGATTGCAAAACTTCAGCACAGGAATCTTGTAAAACTTTTAGGCTGTTGCATTCAAAACCAAGAAAAAATATTGGTTTATGAATATATGTCCAACGGCAGCCTAGATTACTTCATTTTTGATCACACAAAAGGTAAACTACTTGACTGGAAAAAGCGTTTCCACATAATTTGTGGACTTGCAAGAGGACTTATGTATCTTCATGAAGATTCTCGACTAAGGATTGTCCATAGAGACCTCAAAGGGAGTAATGTTCTTCTAGATGAAGATTTCAATCCAAAAATATCAGATTTTGGATTGGCTAAAACTGTTGGAAAAGAGGAGATTGAAGGAAACACAAATATGATAGTTGGAACATTTGGGTACATGGCACCCGAATATGCTATTGATGGTCAGTTTTCTATAAAATCTGATGTATTCAGCTTTGGTGTTATATTGTTGGAGATAATATGTGGGAGGAAAAATAGAGGATCATATCATGGAAAGCAATATAACCTTGTTGATCATGCATGGACATTGTGGAAATTTGGAAAGACTTCAGAAATAATTGACCCAAACATTGAGAGTTCATGCATTGAATCTGAATTGTTACGTTGCATCCATATTGGGCTATTGTGTGTTCAACAATACCCAGAGGATAGGCCTACAATGAGTTCAGTGGTTTTAATGTTGGGAAGTGAGATGGATTTGGATGAACCAAAAAGGCCGGGGATTTTCAATAAGAAGGAATCTATTGAAGCAAGTTCAAGCTCAAGTAGTTCAACCAATGCCCTAACCATAACCCTAAAGGCTCGGTGA 2361 0.3964 MKFILVTLTSLLLIPFIPSVVSTVQDTSSISQSQSLSYGNTIVSRPLGTFELGFFNLGNPNKIYLGIWYKNIPIQNVVWIANGANPINESSAILKLNSSGNLVISHNNIDVWYTSSANDAQNPVAVLLDSGNLVIRDQSAANTEEYLWQSFDYPSNTMVAGMKIGWDIKRNFSIRIVSWKSYDDPTPGDLSWGIKLYPYPDTYIMKGTKKFCRTGPWNGLRFSGRPNLRPNKVYNYEFVSNKEEVYYTWTLVNTSLTTIVVLNQTSEERPRYVWLEDTKSWSPYLTIPAELCDHYGVCGANAYCAPSASPMCECLKGFEPKSRENWSTTDWSQGCVLKHALNCKNDGFVPVEGLKVPDTEHTSVDQSIDLAQCRSKCLNDCSCMAYTNYNISGSGSGCVMWFGDLIDIIQYSNATYGQALYIRLPKSELEDAINRRRKSTIKLVTSIPVASGMLLLGIYFICRFRRKKNAATDNFSEMNRIGEGGFGPVYWGKLFSGLEIAVKRLSQNSGQGITEFVNEVKLIAKLQHRNLVKLLGCCIQNQEKILVYEYMSNGSLDYFIFDHTKGKLLDWKKRFHIICGLARGLMYLHEDSRLRIVHRDLKGSNVLLDEDFNPKISDFGLAKTVGKEEIEGNTNMIVGTFGYMAPEYAIDGQFSIKSDVFSFGVILLEIICGRKNRGSYHGKQYNLVDHAWTLWKFGKTSEIIDPNIESSCIESELLRCIHIGLLCVQQYPEDRPTMSSVVLMLGSEMDLDEPKRPGIFNKKESIEASSSSSSSTNALTITLKAR 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00989 786 ProSiteProfiles PAN/Apple domain profile. 343 425 IPR003609 -
Viun11g00989 786 Gene3D - 21 151 IPR036426 -
Viun11g00989 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Viun11g00989 786 CDD STKc_IRAK 481 745 - -
Viun11g00989 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Viun11g00989 786 SMART blect_4 33 154 IPR001480 -
Viun11g00989 786 Pfam S-locus glycoprotein domain 213 322 IPR000858 GO:0048544
Viun11g00989 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 151 - -
Viun11g00989 786 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 753 - -
Viun11g00989 786 Pfam PAN-like domain 343 408 IPR003609 -
Viun11g00989 786 Pfam Protein tyrosine and serine/threonine kinase 478 743 IPR001245 GO:0004672|GO:0006468
Viun11g00989 786 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 736 - -
Viun11g00989 786 Pfam D-mannose binding lectin 77 180 IPR001480 -
Viun11g00989 786 Gene3D Transferase(Phosphotransferase) domain 1 551 761 - -
Viun11g00989 786 ProSiteProfiles Protein kinase domain profile. 475 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00989 786 PIRSF SRK 465 786 IPR024171 GO:0004674
Viun11g00989 786 PIRSF SRK 1 470 IPR024171 GO:0004674
Viun11g00989 786 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Viun11g00989 786 FunFam Os08g0179000 protein 459 550 - -
Viun11g00989 786 Gene3D Phosphorylase Kinase; domain 1 465 550 - -
Viun11g00989 786 SMART serkin_6 475 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00989 786 CDD PAN_AP_plant 341 425 - -
Viun11g00989 786 SUPERFAMILY Protein kinase-like (PK-like) 467 747 IPR011009 -
Viun11g00989 786 SMART ntp_6 343 424 IPR003609 -
Viun11g00989 786 MobiDBLite consensus disorder prediction 764 786 - -
Viun11g00989 786 CDD B_lectin 39 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00989 Viun-Chr11 20167508 20171335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00989 441 759 Receptor kinase-like Gene Family AT4G23230 52.616 1.63e-116 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00989 PK_Tyr_Ser-Thr 9.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00989 - - gmx:100808807 1194.87