Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00987 ATGGGGATGTTTTCTTTCATGATTATTGTTGCTTACATGCTTGTTCCTGCTCTCAAAATTTCCGCAGCTAACCTCACTATGTCACAGTCAATAATTGACAGCGAGACATTAGTATCCAACAGCGGACAGTTTGAGCTCGGGTTCTTCACCCCAGGTAACTCCACAAAACGCTACCTTGGAATTTGGTATAAAATTATACCTGTTGAACGAGTTGTTTGGGTTCCATACGGCGCAAACGCAATTAATGATTCCTCGGGCATTTTAGCCTTCAGCAAGACAGGGAATCTTGAGCTCAGACAAAACGACACAGTTGTCTGGTCCGCAACCTATCGAAAACAAGCACGGAATCCAGTGGCAGTGCTCTTGGACAGTGGCAATTTTGTGGTAAGAAATGAGGGAGAAACAGAGCCAGATGAGTATCTGTGGCAAAGCTTTGACTATCCTTCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCAGAACTGGTCTGGAACGGAACCTAACATCTTGGAAGAGTCCGGATGATCCATCCCCAGGAGACGATTCTTGGGTTCTAAGGCTTAATAATTATCCTGAGTTTTACCTGATGCAGGGAAAACATAAGTCCAACCGCATTGGACCTTGGAATGGACTTTTTTTCAGTGGTCTATCACTTCAAAAGCCAAATCCAATCTACAAATTCGAGTACGTCGTTAAAAGTGACGTTTTGTACGCCCCCAACAAGGTTGAGATGTCGTATTCGCTTGTTCTTAAGAATACTTCGGTCCTCGTTGCAGTTACCATAAGCAAAGGTCGCTTCCGAACCCGTCGTTGGGTGGAAACTGCGCAAAGTTGGGAAACTTATGATGAATCTAACCTAAATGACATTTGTGATATGTATGCCTTGTGTGGAGCCTACGGGAATTGCTTGACAACAGCGTCACCACTTTGCCTATGTTTAAAAGGATTCAGTCCAAACTCACGACAAGAATGGAATACAATGGACTGGAGTGGAGGATGCATCCGGAAGAAACCATTAAGCTGCAAAGAGTTCTACAAGGATGAGTTTGTGAAATATGTAGGCCTGAAAGTACCAGATACGACACATACGTGGGTTGATGAGAATATTGATTTAGATGATTGCAGAAGCAGATGCTTGAGTAATTGTTCTTGTATGGCGTTTACTAATTCAGACATAAACGGGCCAGGTAGTGGCTGTGTCATGTGGTTTGGAGATCTTGTTGATATGCGGCAGTTTGAAACTGGTGGGCAAGATCTATATATCCGGATGTCTTCTGCAAATTCAGAAAAGTCAGAGAAAAAAGACAACATTAAAAGGCAGCTAGAAGATCTAGACATGCCATTGTTTGATCTGTTTACAATCACTACTGCCACTAACAATTTCTCGAGCAATAATATGATAGGAAAAGGTGGTTTTGGACCTGTATACAAGGGAAAATTAGCGGATGGGCAAGAGATTGCTGTGAAAAGACTTTCAAGAAGTTCTGGACAAGGAATGACCGAGTTCATAACAGAAGTGAAACTGATTGCAAAGGTTCAACACCGTAATCTGGTAAAGCTACTTGGCTGTTGCATCCGAGGAGAAGAAAAAATACTAGTATATGAATACATGGTTAATGGAAGCCTAGATTCCTTCATCTTTGATGAACAAAAAGGTAAATTTCTTGATTGGCCTATGCGCTTCCAAATAATACTTGGAGTTGCAAGAGGGCTTCTGTATCTTCACCAAGATTCCCGGTTAAGGATAATACATAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAATTTAAATCCAAAAATTTCAGACTTTGGAATGGCTAGAGCTTTTGGAGGAGACCAAACCGAAGGAAACACAAACAGAGTAGTTGGGACATTTGGGTATATGGCCCCAGAGTATGCCGTTCATGGACTATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTGTATGTGGGAACAAAAATAGACCTCTGTGTCATGGAAACCAGACTCTTAACCTTGTTGGTTATGCATGGGAACTTTGGAAAGAGAAAAATGCCTTAGATTTGATAGACTCAAATGTGAAGGACTCGTGTGTAATCACAGAAGCATTGCGATGCATCCATATCAGTCTCTTGTGCGTGCAACAGTACCCGGAAGATAGGCCAACCATGACATCCATAATTCAAATGTTAGGCAGTGAGAGGGAACTGGTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAAGAGAATTTCAAATGATGAAAATCTAAACAAAATGTCTATGAATGAAGAATTAAGCATTACGTCTTTAAATGGCCGGTGA 2334 0.4143 MGMFSFMIIVAYMLVPALKISAANLTMSQSIIDSETLVSNSGQFELGFFTPGNSTKRYLGIWYKIIPVERVVWVPYGANAINDSSGILAFSKTGNLELRQNDTVVWSATYRKQARNPVAVLLDSGNFVVRNEGETEPDEYLWQSFDYPSDTLLPGMKLGWDLRTGLERNLTSWKSPDDPSPGDDSWVLRLNNYPEFYLMQGKHKSNRIGPWNGLFFSGLSLQKPNPIYKFEYVVKSDVLYAPNKVEMSYSLVLKNTSVLVAVTISKGRFRTRRWVETAQSWETYDESNLNDICDMYALCGAYGNCLTTASPLCLCLKGFSPNSRQEWNTMDWSGGCIRKKPLSCKEFYKDEFVKYVGLKVPDTTHTWVDENIDLDDCRSRCLSNCSCMAFTNSDINGPGSGCVMWFGDLVDMRQFETGGQDLYIRMSSANSEKSEKKDNIKRQLEDLDMPLFDLFTITTATNNFSSNNMIGKGGFGPVYKGKLADGQEIAVKRLSRSSGQGMTEFITEVKLIAKVQHRNLVKLLGCCIRGEEKILVYEYMVNGSLDSFIFDEQKGKFLDWPMRFQIILGVARGLLYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGMARAFGGDQTEGNTNRVVGTFGYMAPEYAVHGLFSIKSDVFSFGILLLEIVCGNKNRPLCHGNQTLNLVGYAWELWKEKNALDLIDSNVKDSCVITEALRCIHISLLCVQQYPEDRPTMTSIIQMLGSERELVEPKEPGFFPKRISNDENLNKMSMNEELSITSLNGR 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00987 777 SMART serkin_6 464 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00987 777 Pfam D-mannose binding lectin 71 174 IPR001480 -
Viun11g00987 777 Gene3D - 18 145 IPR036426 -
Viun11g00987 777 SUPERFAMILY Protein kinase-like (PK-like) 444 735 IPR011009 -
Viun11g00987 777 Coils Coil 426 446 - -
Viun11g00987 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Viun11g00987 777 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Viun11g00987 777 ProSiteProfiles Protein kinase domain profile. 464 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00987 777 SMART ntp_6 347 426 IPR003609 -
Viun11g00987 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 179 IPR036426 -
Viun11g00987 777 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 726 - -
Viun11g00987 777 CDD STKc_IRAK 470 735 - -
Viun11g00987 777 Pfam Protein tyrosine and serine/threonine kinase 467 735 IPR001245 GO:0004672|GO:0006468
Viun11g00987 777 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Viun11g00987 777 PIRSF SRK 425 777 IPR024171 GO:0004674
Viun11g00987 777 PIRSF SRK 1 446 IPR024171 GO:0004674
Viun11g00987 777 Gene3D Phosphorylase Kinase; domain 1 424 539 - -
Viun11g00987 777 CDD B_lectin 28 148 IPR001480 -
Viun11g00987 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 540 743 - -
Viun11g00987 777 Gene3D Transferase(Phosphotransferase) domain 1 540 746 - -
Viun11g00987 777 SMART blect_4 28 148 IPR001480 -
Viun11g00987 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 428 539 - -
Viun11g00987 777 Pfam S-locus glycoprotein domain 207 322 IPR000858 GO:0048544
Viun11g00987 777 Pfam PAN-like domain 349 412 IPR003609 -
Viun11g00987 777 CDD PAN_AP_plant 341 425 - -
Viun11g00987 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00987 Viun-Chr11 20120995 20124449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00987 424 749 Receptor kinase-like Gene Family AT4G23230 56.269 4.52e-121 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00987 PK_Tyr_Ser-Thr 4.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00987 - - gmx:100812007 1162.52