Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00986 ATGATATTATTCAGTGTCCGATTGACAAATTCGTCAATGGGGATGTTTTCATTCATGATTATTGTTGCTTACGTGCTTGTTCCCGTTCTCAAAATTTCCGCGGCTAACCTCACTGTGTCACAGTCAATCATTGACGGCGAGACATTAGTGTCCAACAGTGGACAATTTGAGCTCGGTTTCTTCACCCCAGGTAAATCCACAAAACGCTACCTTGGAATTTGGTATAAAATCATACCTGTTCAACGAGTTGTTTGGGTTCCAAACGGTGCAAACCCGATCAATGATAGCTCAGGTATTTTGGCATTCAGCAAGACATGGAATCTTGAGGTCAGACAAAACGACACAGTTGTCTGGTCTGCAACCTATCAAAAACAAGCACGGAATCCAGAGGCAGTGCTCTTGGATAATGGCAATTTTGTGATAAGAAATGAGGGAGAAACAAACCCAGATGAGTATTTGTGGCAGAGCTTTGACTATCCATCGGATACACTATTGCCAGGGATGAAGTTGGGATGGGACCTCCGAACTGGTCTGGAACGGAGAATAACGTCATGGAAGAGTTCAGATGATCCATCCCCAGGAGATCATTCTTGGGGTCTAAAGCTTAATAATTATCCCGAGTTTTACCTGATGAACGGCACGCGTAAGTCTTCCCGCATTGGACCTTGGAATGGACTTTATTTCAGTGGCGTATCACAACAAAAGCCAAATCCATTCTACGAATTCAAGTACGTCGTTAAAAATGACCTTAAGTACGCTCCCAACAAGGTTGAGATGTCGTACTCGTTTGTTCCTAAGAATAGTTCGGTCCTCGTGGCAATTACCATAGGCGAAGGCCAATTCGAAACCCGACGATGGGGGGAAACCATGGAACGTTGGGGGGTTTTTGAATCTACCCCAAAAGACGCGTGTGATACTTACGGATACTGTGGAGCCTACGGGAACTGCTGGATAACAGTGTCACCAGTTTGCCAATGTTTAGAAGGATTCAGTCCAAAGTCAACACAAGAATGGAATGTAATGAACTGGACTGAAGGATGCATCCGGAAGAAACCATTAAGCTGCAAAGAGTACTACAAGGATGAGTTTGTGAAATATGTAGGCCTGAAAGTACCAGATACGACACATACTTGGGTTGATGAGAGTATTGATTTAGATGATTGCCGAAGGAGATGCTTGAGTAATTGCTCTTGCATGGCCTTTACTAATTCAGACATAAGAGGAGCAGGTAGTGGCTGTGTCATGTGGTTTGGAGATCTTATTGACATCCGACACTTTGAAACTGGTGGGCAAGATCTATATATCCGGATGTCTTCTGCAAATTCAGATCTCACCACAAACACTCGGGCTCAACAACGACACAAACGTGTGAAGATAATTATTGCTACCACAACTGCTGCAATTAGTGGCATACTTTTATTTTGCATTTTTGTCATGTACAGAGTCAGAAGAAACATAGCAGAGAAGTCAGAGAAAAAAGAGAACATTGAAAGGCAGCTAGAAGATCTAGACATGCCATTGTTTGATCTATGTACAATCACTACTGCCACTAACAATTTCTCGAGCAATAATATGATAGGAAAAGGTGGTTTTGGACCTGTATACAAGGGAAAATTAGCTGATGGGCAAGAGATTGCTGTGAAGAGACTTTCAAGAAGTTCTGGACAAGGAATAACCGAGTTCATAACAGAAGTGAAACTGATTGCAAAGGTTCAACACCGTAATCTGGTAAAGCTACTTGGCTGTTGCATCCGAGAAGAAAAAATACTAGTATACGAATACATGGTTAATGGAAGCCTAGATTCCTTCATCTTCGATGAACAAAAAGGTAAATTTCTTGATTGGCCTATGCGCTTCCAAATAATACTTGGAGTTGCAAGAGGGCTTCTGTATCTTCACCAAGATTCCCGGTTAAGGATAATACACAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAATTTAAATCCAAAAATTTCAGACTTTGGAATGGCCAGAGCTTTTGGAGGAGACCAAACCGAAGGAAACACAAACAGGGTAGTTGGGACATTTGGGTATATGGCCCCAGAGTATGCCGTTCATGGACTATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTGTATGTGGGAACAAAAATAGACCTCTGTGTCATGGAAACCAGACTCTTAACCTTGTTGGCTGTGCATGGGAACTTTGGAAAGAGAAAAATGCCTTAGATTTGATAGACTCAAATGTGAAGGACTCGTGTGTAATCACAGAAGCACTGCGATGCATCCATGTCAGTCTCTTGTGCGTGCAACAATACCCGGAAGATAGACCAACCATGACATCCATAATTCAAATGTTAGTCAGTGAGATGGAACTGGTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAAGAGAATTTCGGATGATGAAAATGTAAACAAAATGTCTATAAATGAAGAATTAAGCATTACCTCTTTAAATGGCCGGTGA 2499 0.4166 MILFSVRLTNSSMGMFSFMIIVAYVLVPVLKISAANLTVSQSIIDGETLVSNSGQFELGFFTPGKSTKRYLGIWYKIIPVQRVVWVPNGANPINDSSGILAFSKTWNLEVRQNDTVVWSATYQKQARNPEAVLLDNGNFVIRNEGETNPDEYLWQSFDYPSDTLLPGMKLGWDLRTGLERRITSWKSSDDPSPGDHSWGLKLNNYPEFYLMNGTRKSSRIGPWNGLYFSGVSQQKPNPFYEFKYVVKNDLKYAPNKVEMSYSFVPKNSSVLVAITIGEGQFETRRWGETMERWGVFESTPKDACDTYGYCGAYGNCWITVSPVCQCLEGFSPKSTQEWNVMNWTEGCIRKKPLSCKEYYKDEFVKYVGLKVPDTTHTWVDESIDLDDCRRRCLSNCSCMAFTNSDIRGAGSGCVMWFGDLIDIRHFETGGQDLYIRMSSANSDLTTNTRAQQRHKRVKIIIATTTAAISGILLFCIFVMYRVRRNIAEKSEKKENIERQLEDLDMPLFDLCTITTATNNFSSNNMIGKGGFGPVYKGKLADGQEIAVKRLSRSSGQGITEFITEVKLIAKVQHRNLVKLLGCCIREEKILVYEYMVNGSLDSFIFDEQKGKFLDWPMRFQIILGVARGLLYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGMARAFGGDQTEGNTNRVVGTFGYMAPEYAVHGLFSIKSDVFSFGILLLEIVCGNKNRPLCHGNQTLNLVGCAWELWKEKNALDLIDSNVKDSCVITEALRCIHVSLLCVQQYPEDRPTMTSIIQMLVSEMELVEPKEPGFFPKRISDDENVNKMSINEELSITSLNGR 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00986 832 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Viun11g00986 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Viun11g00986 832 CDD STKc_IRAK 526 790 - -
Viun11g00986 832 Gene3D Transferase(Phosphotransferase) domain 1 595 801 - -
Viun11g00986 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Viun11g00986 832 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00986 832 SMART ntp_6 358 437 IPR003609 -
Viun11g00986 832 Gene3D Phosphorylase Kinase; domain 1 480 594 - -
Viun11g00986 832 Pfam PAN-like domain 359 423 IPR003609 -
Viun11g00986 832 Gene3D - 29 157 IPR036426 -
Viun11g00986 832 ProSiteProfiles EGF-like domain profile. 300 336 IPR000742 -
Viun11g00986 832 SUPERFAMILY Protein kinase-like (PK-like) 500 790 IPR011009 -
Viun11g00986 832 CDD B_lectin 40 160 IPR001480 -
Viun11g00986 832 SMART blect_4 40 160 IPR001480 -
Viun11g00986 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 157 - -
Viun11g00986 832 PIRSF SRK 7 832 IPR024171 GO:0004674
Viun11g00986 832 CDD PAN_AP_plant 352 436 - -
Viun11g00986 832 ProSiteProfiles PAN/Apple domain profile. 355 438 IPR003609 -
Viun11g00986 832 Pfam Protein tyrosine and serine/threonine kinase 523 790 IPR001245 GO:0004672|GO:0006468
Viun11g00986 832 Pfam D-mannose binding lectin 83 186 IPR001480 -
Viun11g00986 832 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 781 - -
Viun11g00986 832 Coils Coil 479 499 - -
Viun11g00986 832 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 594 - -
Viun11g00986 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 191 IPR036426 -
Viun11g00986 832 SMART serkin_6 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00986 832 Pfam S-locus glycoprotein domain 219 334 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00986 Viun-Chr11 20106659 20110047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00986 459 807 Receptor kinase-like Gene Family AT4G23190 51.404 1.11e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00986 PK_Tyr_Ser-Thr 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00986 - - gmx:100812007 1243.02