Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00985 ATGATATTATTCAGTGTCCGATTGACAAATTCGTCAATGGGGATGTTTTCATTCATGATTATTGTTGCTTACGTGCTTGTTCCCGTTCTCAAAATTTCCGCGGCTAACCTCACTGTGTCACAGTCAATCATTGACGGCGAGACATTAGTGTCCAACAGTGGACAATTTGAGCTCGGTTTCTTCACCCCAGGTAAATCCACAAAACGCTACCTTGGAATTTGGTATAAAATCATACCTGTTCAACGAGTTGTTTGGGTTCCAAACGGTGCAAACCCGATCAATGATAGCTCAGGTATTTTGGCATTCAGCAAGACATGGAATCTTGAGGTCAGACAAAACGACACAGTTGTCTGGTCTGCAACCTATCAAAAACAAGCACGGAATCCAGAGGCAGTGCTCTTGGATAATGGCAATTTTGTGATAAGAAATGAGGGAGAAACAAACCCAGATGAGTATTTGTGGCAGAGCTTTGACTATCCATCGGATACACTATTGCCAGGGATGAAGTTGGGATGGGACCTCCGAACTGGTCTGGAACGGAGAATAACGTCATGGAAGAGTTCAGATGATCCATCCCCAGGAGATCATTCTTGGGGTCTAAAGCTTAATAATTATCCCGAGTTTTACCTGATGAACGGCACGCGTAAGTCTTCCCGCATTGGACCTTGGAATGGACTTTATTTCAGTGGCGTATCACAACAAAAGCCAAATCCATTCTACGAATTCAAGTACGTCGTTAAAAATGACCTTAAGTACGCTCCCAACAAGGTTGAGATGTCGTACTCGTTTGTTCCTAAGAATAGTTCGGTCCTCGTGGCAATTACCATAGGCGAAGGCCAATTCGAAACCCGACGATGGGGGGAAACCATGGAACGTTGGGGGGTTTTTGAATCTACCCCAAAAGACGCGTGTGATACTTACGGATACTGTGGAGCCTACGGGAACTGCTGGATAACAGTGTCACCAGTTTGCCAATGTTTAGAAGGATTCAGTCCAAAGTCAACACAAGAATGGAATGTAATGAACTGGACTGAAGGATGCATCCGGAAGAAACCATTAAGCTGCAAAGAGTACTACAAGGATGAGTTTGTGAAATATGTAGGCCTGAAAGTACCAGATACGACACATACTTGGGTTGATGAGAGTATTGATTTAGATGATTGCCGAAGGAGATGCTTGAGTAATTGCTCTTGCATGGCCTTTACTAATTCAGACATAAGAGGAGCAGGTAGTGGCTGTGTCATGTGGTTTGGAGATCTTATTGACATCCGACACTTTGAAACTGGTGGGCAAGATCTATATATCCGGATGTCTTCTGCAAATTCAGAGAAGTCAGAGAAAAAAGAGAACATTGAAAGGCAGCTAGAAGATCTAGACATGCCATTGTTTGATCTATGTACAATCACTACTGCCACTAACAATTTCTCGAGCAATAATATGATAGGAAAAGGTGGTTTTGGACCTGTATACAAGGGAAAATTAGCTGATGGGCAAGAGATTGCTGTGAAGAGACTTTCAAGAAGTTCTGGACAAGGAATAACCGAGTTCATAACAGAAGTGAAACTGATTGCAAAGGTTCAACACCGTAATCTGGTAAAGCTACTTGGCTGTTGCATCCGAGAAGAAAAAATACTAGTATACGAATACATGGTTAATGGAAGCCTAGATTCCTTCATCTTCGATGAACAAAAAGGTAAATTTCTTGATTGGCCTATGCGCTTCCAAATAATACTTGGAGTTGCAAGAGGGCTTCTGTATCTTCACCAAGATTCCCGGTTAAGGATAATACACAGAGATCTCAAAGCAAGTAATGTTTTACTTGATGAAAATTTAAATCCAAAAATTTCAGACTTTGGAATGGCCAGAGCTTTTGGAGGAGACCAAACCGAAGGAAACACAAACAGGGTAGTTGGGACATTTGGGTATATGGCCCCAGAGTATGCCGTTCATGGACTATTTTCAATCAAATCTGATGTTTTCAGCTTTGGTATTTTGTTGTTGGAGATTGTATGTGGGAACAAAAATAGACCTCTGTGTCATGGAAACCAGACTCTTAACCTTGTTGGCTGTGCATGGGAACTTTGGAAAGAGAAAAATGCCTTAGATTTGATAGACTCAAATGTGAAGGACTCGTGTGTAATCACAGAAGCACTGCGATGCATCCATGTCAGTCTCTTGTGCGTGCAACAATACCCGGAAGATAGACCAACCATGACATCCATAATTCAAATGTTAGTCAGTGAGATGGAACTGGTTGAGCCTAAAGAGCCTGGTTTCTTTCCAAAGAGAATTTCGGATGATGAAAATGTAAACAAAATGTCTATAAATGAAGAATTAAGCATTACCTCTTTAAATGGCCGGTGA 2364 0.4179 MILFSVRLTNSSMGMFSFMIIVAYVLVPVLKISAANLTVSQSIIDGETLVSNSGQFELGFFTPGKSTKRYLGIWYKIIPVQRVVWVPNGANPINDSSGILAFSKTWNLEVRQNDTVVWSATYQKQARNPEAVLLDNGNFVIRNEGETNPDEYLWQSFDYPSDTLLPGMKLGWDLRTGLERRITSWKSSDDPSPGDHSWGLKLNNYPEFYLMNGTRKSSRIGPWNGLYFSGVSQQKPNPFYEFKYVVKNDLKYAPNKVEMSYSFVPKNSSVLVAITIGEGQFETRRWGETMERWGVFESTPKDACDTYGYCGAYGNCWITVSPVCQCLEGFSPKSTQEWNVMNWTEGCIRKKPLSCKEYYKDEFVKYVGLKVPDTTHTWVDESIDLDDCRRRCLSNCSCMAFTNSDIRGAGSGCVMWFGDLIDIRHFETGGQDLYIRMSSANSEKSEKKENIERQLEDLDMPLFDLCTITTATNNFSSNNMIGKGGFGPVYKGKLADGQEIAVKRLSRSSGQGITEFITEVKLIAKVQHRNLVKLLGCCIREEKILVYEYMVNGSLDSFIFDEQKGKFLDWPMRFQIILGVARGLLYLHQDSRLRIIHRDLKASNVLLDENLNPKISDFGMARAFGGDQTEGNTNRVVGTFGYMAPEYAVHGLFSIKSDVFSFGILLLEIVCGNKNRPLCHGNQTLNLVGCAWELWKEKNALDLIDSNVKDSCVITEALRCIHVSLLCVQQYPEDRPTMTSIIQMLVSEMELVEPKEPGFFPKRISDDENVNKMSINEELSITSLNGR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00985 787 CDD STKc_IRAK 481 745 - -
Viun11g00985 787 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Viun11g00985 787 Pfam PAN-like domain 359 423 IPR003609 -
Viun11g00985 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Viun11g00985 787 Coils Coil 437 457 - -
Viun11g00985 787 Pfam D-mannose binding lectin 83 186 IPR001480 -
Viun11g00985 787 SMART ntp_6 358 437 IPR003609 -
Viun11g00985 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 30 157 - -
Viun11g00985 787 ProSiteProfiles EGF-like domain profile. 300 336 IPR000742 -
Viun11g00985 787 PIRSF SRK 7 458 IPR024171 GO:0004674
Viun11g00985 787 PIRSF SRK 436 787 IPR024171 GO:0004674
Viun11g00985 787 CDD B_lectin 40 160 IPR001480 -
Viun11g00985 787 SMART blect_4 40 160 IPR001480 -
Viun11g00985 787 CDD PAN_AP_plant 352 436 - -
Viun11g00985 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 191 IPR036426 -
Viun11g00985 787 Pfam Protein tyrosine and serine/threonine kinase 478 745 IPR001245 GO:0004672|GO:0006468
Viun11g00985 787 ProSiteProfiles PAN/Apple domain profile. 355 438 IPR003609 -
Viun11g00985 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 439 549 - -
Viun11g00985 787 Gene3D Transferase(Phosphotransferase) domain 1 550 756 - -
Viun11g00985 787 Gene3D - 29 157 IPR036426 -
Viun11g00985 787 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 736 - -
Viun11g00985 787 Pfam S-locus glycoprotein domain 219 334 IPR000858 GO:0048544
Viun11g00985 787 SMART serkin_6 475 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00985 787 SUPERFAMILY Protein kinase-like (PK-like) 455 745 IPR011009 -
Viun11g00985 787 Gene3D Phosphorylase Kinase; domain 1 435 549 - -
Viun11g00985 787 ProSiteProfiles Protein kinase domain profile. 475 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00985 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 550 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00985 Viun-Chr11 20106659 20110047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00985 402 762 Receptor kinase-like Gene Family AT4G23190 51.087 3.66e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00985 PK_Tyr_Ser-Thr 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00985 - - gmx:100812007 1184.09