Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00983 ATGGATACTATAGCGAGCGTGGCATCAAGCGTGGCTGTACCCCTGCTGCGAAACATCACCTACGTGTTGATGTACAGCACTTACCTGACAGAGCTGGAAACGGAGATTAAGAAGCTGCAGAGTGAGGAGAAGGAAGTGAGGCACACGGTTGAAGCTGCCAAAAGGGGCGGTGAAGAGATCGAGGACACCGTGCGTGACTGGTTCGACCGAGTGCGTGCAGCTGTGGAGCAGGGGCAGACATTCCTTGAGGAGGAAGAGAGGGAAAGGGTTGGATGCATGGACGTGTACTCGAAGTACATGAACAGCCAGAGAGCGAGAACCTTGGTGGAGATTATTAGGGAGGTAAGGAAAGAGACGTTTGATCGTGTTTCCTACAGGCGTGCGTTGAGATGCAATGTTGGTCCTGCTTCAAGAGAGTATGTTGCTATTCAATCGAGAACTGTGATGTTGAATGAGGTCGTGAAGATGCTGAAGGATGGTGGGGTTGACATTGTTGGAGTGTATGGAGTGGCCGGCGTGGGGAAAACTGCAATGGTGAAGGAATTGGCGTGGCAGGTTGAGAAGGATGGTTTGTTTGATGCGGTGGTGGTGGCCACCGTGACGGATTCGCCGGATGTGGGAAGGATCCGCAATGAGATTGCTGATGGGTTGGGGTTGAAGTTTGATGAGCTGACGGAGCTGGGGCGGGCGAGCCGGTTGCGCCAGAGGATCCGGCAGGAGCAGAGAATTCTTGTGGTGTTGGATGATGTGTGGGGGAAGCTCGATTTGACAAAGATTGGTGTGCCTTTTGGTGAGGACTACAAAGGTTGCAGATGCCAGTTGTTGGTCACATCCAGGAATCGTAATGTGTTGAGTTCTAATTTTGGTTCAGGGAAGTTTTATAGGCTTGAGGTTTTGTCTGAGGATGAAAGTTGGGAGTTGTTTGAGAAGAGGGCAGGGGATGCGGTTAGCGACCCAAGCATTCAATCAATGGCTGAAAAAGTAGCGAAAAGCTGTGCTGGATTGCCTCTTCTGATAGTCACAGTGGTGGAGGAATTGAAGAACAAGGATTTATATGCTTGGAAGGATGCACTGGAGCAGATAACGAGTTTTGAACTAGAAGGGGATCTTTATTCACCATTTCGTTCTGCTATTGAGCTGAGTTATGACCATTTGGAAAGTCAGGAACTAAAAACATTCTTCCTGCTTTTGGGTTCCATGGGAAATGGTTGCAGCACAAGAGATTTGTTGGTGTTTGGTTGGTGCCTGGGACTGCACAAACATGTTGACTCATTGGCAGATGGGAGAAACAGACTTCACAAATTGATAGACAACCTGAGAGCTGCTTGTTTGTTACTTGATGAGGGGAAAAGAGATTCTGTCGTGGCGCTTGAGGTGGTTCGACATGTGGCTGCCTCTATAGCATCCAGGGTCAAACCTTTCTTTACTGTGCAGAGAAACAAGGAATTTAAATGGCCCAGAATGGATTTCTTTAGAACTTGTCATCATATTTTCTTAGACAGGTGTTATATCCGCGAACTTCCTGAGGTGTTAGAATGTCCCAAGTTGAAGATACTCCAAATAAATAGTCAAGGTAACTATTTGAAAATCCCTGATGATTTTTTTGTTGAGATGAAAGAGTTGAAGGTGCTGAGTTTAGGAGGTCTAAATGGTACTCCATCGCTCCCTCCCTCTCTCAGCCTCTTGACAGACCTCCAAGCATTGTTTTTGTGTAAGTGCAAGTTGGAAGACATAGCTACTGTTGGGTCAATCACAAGTTTAGAGATTCTTAATTTGGAAAAATCTGAGCTTAAAGAGCTCCCTGCTGAAATAGGCGGATTAAATAATCTTCGGTTGCTAGATTTGACCGATTGCCCAACACTAGGAGGAATTCCTGGCAATGTGATTTCGAGGTTGACAAGCTTGGAAGAGCTCTACATGGGAAACTGTGATGTTCAAGGGGAGGCTAAGGAAAGCAAAACTCAAGACAATGATTCGAGTCTAGGTGAGTTAAAGCATTTGAATCAAATAACAACTTTGAATGTGCAGATAGAAGATACTTCAGTTTTTCCTAGAGACATGCTTAGCTTTGGGAGACTAGAAAGCTACAAGATTTTGATTGGGGATGGTTGGAAATGGTCTGAGGTGGAGTCTGAGAGTTACAAAACTTCAAGACTTCTTAAGTTAAATTCCGGTGCTGATCCAAGCATTCTAAAGGACTTTGGGATAAAGATGTTGATGAATAAAGCTGAAGATTTGTATTTAGCTGAACTGAAGGGTGTTCGAGAAGTACTTTACGAATTGAATGATGAAGGGTTCTCGCAATTGAAGTATCTCTGCATCCTAAACTGTGATGAAATGGAGAGCATTATTGGCTCAACGGAGTGGTCTTACAGCGATCATGCCTTCCCAAACTTGGAATCATTGATCCTTCACAATCTGATTAACATGGAGAGGATTTGCAGTGACCCCCTTCCAGCACAGGCCTTTAGGAAACTACAAGTTATCAAAGTAAAGGGTTGTGATAGGATGGAATTTCTTTTCTCGCATTCCATGGTTAAACACCTTTCTGAACTTGTTGAGATTGAGATTTCTGAATGCAAATCTATGACCAATATCTTATCTGGGCAAAGACAAGAGGATGCTGATGCTGGACAAACCGACAAGATCAGGCTCATAAACTTGAGTTCACTTACTCTACAATGCTTACCTTCCCTTGTTAGTATCTCTCCTGACTCGAGTACTGAGGCTTCTGAAAACGGCAATGGTTTCTCCAGTCAACTTTTTAATAACAAGGTTGAATTTCCGAACCTGGAGACCCTGAAGCTGTATTCAATCAATATCCACAAGATATGGAATCACCATCATTCTTACTTTGAAAACTTGACCTCTTTGACCGTAGATGGATGTGAAAGGTTGACATATATTTTCTCATACCCTGTGGCTATAAAACTTGTCAAGCTTGAACATCTTATACTTAGTTCGTGCAAATTCGTGGAAAATATATTTGTGCCTGATGAAAACTTGGGTCACACTCACATTCATCACTTTAGAAGATCCGCTCCAACAGAACTGATTCCAATTTTCACCAACCTAGAGACATTTGTGATTTCTCACATGGACAATTTGAAGGCAATATGGCCAGCTCTACTTCCTGAAAATTCGTTTTGTAAACTGAAAAAGATGGAAATAACATCCTGCAACAATCTCTTGAATGTGTTCCCATGTCATGTGCTAGACAAATTACAAAGCTTGGAATCACTGAATGTATGGAACTGTATGGCACTGGAAGTTGTATATGAAATTGATGCTATAAACAGAGAGCAAGAAGGTAGCAGTCAAAGAGTGCTGGACATTCCACTGAGAACTTTGTCTTTGGGTAACTTACCAAAGCTAAAGCATTTGTGGAATAAGGATCCTCAAGGAAATATCAAATTTCAAAACCTGTTTATGGTAAAAGCTTCTAAATGTCAAAGTCTAAAATATGTGTTTCCACTGTCTCTGGCCAAAGACCTTCTGCATCTCCAATTCCTTGAGATAAGTGATTGTGGTGTAGAGGAAATTATTGCAAGTGATAAGGGAGGGGTAGGGGCTCTTGGGTTTGTTTTCCCAAAATTAGTATCCATAAAACTTTTTAATTTGCCAGACCTTCAATGCTTTTGTAACGGAAATCACAACCTCAGATTTCCATTGTTGAATCAATTTTATGCTGTTGAATGCCCAAGAATGGAGACTTTCTCTGGGGGAATTTTAAGGGCATCGATTCTTAGAAAAATATTTATGACTCGGGAAGGAGATCAGTGGTACTGGGAAGGCGACCTTAATACAACTATAAGAAAGCTTGTCAATAGAGATCTCCAAACAAGATTAAGCATTTTGTAG 3861 0.4281 MDTIASVASSVAVPLLRNITYVLMYSTYLTELETEIKKLQSEEKEVRHTVEAAKRGGEEIEDTVRDWFDRVRAAVEQGQTFLEEEERERVGCMDVYSKYMNSQRARTLVEIIREVRKETFDRVSYRRALRCNVGPASREYVAIQSRTVMLNEVVKMLKDGGVDIVGVYGVAGVGKTAMVKELAWQVEKDGLFDAVVVATVTDSPDVGRIRNEIADGLGLKFDELTELGRASRLRQRIRQEQRILVVLDDVWGKLDLTKIGVPFGEDYKGCRCQLLVTSRNRNVLSSNFGSGKFYRLEVLSEDESWELFEKRAGDAVSDPSIQSMAEKVAKSCAGLPLLIVTVVEELKNKDLYAWKDALEQITSFELEGDLYSPFRSAIELSYDHLESQELKTFFLLLGSMGNGCSTRDLLVFGWCLGLHKHVDSLADGRNRLHKLIDNLRAACLLLDEGKRDSVVALEVVRHVAASIASRVKPFFTVQRNKEFKWPRMDFFRTCHHIFLDRCYIRELPEVLECPKLKILQINSQGNYLKIPDDFFVEMKELKVLSLGGLNGTPSLPPSLSLLTDLQALFLCKCKLEDIATVGSITSLEILNLEKSELKELPAEIGGLNNLRLLDLTDCPTLGGIPGNVISRLTSLEELYMGNCDVQGEAKESKTQDNDSSLGELKHLNQITTLNVQIEDTSVFPRDMLSFGRLESYKILIGDGWKWSEVESESYKTSRLLKLNSGADPSILKDFGIKMLMNKAEDLYLAELKGVREVLYELNDEGFSQLKYLCILNCDEMESIIGSTEWSYSDHAFPNLESLILHNLINMERICSDPLPAQAFRKLQVIKVKGCDRMEFLFSHSMVKHLSELVEIEISECKSMTNILSGQRQEDADAGQTDKIRLINLSSLTLQCLPSLVSISPDSSTEASENGNGFSSQLFNNKVEFPNLETLKLYSINIHKIWNHHHSYFENLTSLTVDGCERLTYIFSYPVAIKLVKLEHLILSSCKFVENIFVPDENLGHTHIHHFRRSAPTELIPIFTNLETFVISHMDNLKAIWPALLPENSFCKLKKMEITSCNNLLNVFPCHVLDKLQSLESLNVWNCMALEVVYEIDAINREQEGSSQRVLDIPLRTLSLGNLPKLKHLWNKDPQGNIKFQNLFMVKASKCQSLKYVFPLSLAKDLLHLQFLEISDCGVEEIIASDKGGVGALGFVFPKLVSIKLFNLPDLQCFCNGNHNLRFPLLNQFYAVECPRMETFSGGILRASILRKIFMTREGDQWYWEGDLNTTIRKLVNRDLQTRLSIL 1286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00983 1286 Gene3D - 124 289 IPR027417 -
Viun11g00983 1286 Gene3D - 298 386 IPR042197 -
Viun11g00983 1286 PRINTS Disease resistance protein signature 237 251 - -
Viun11g00983 1286 PRINTS Disease resistance protein signature 164 179 - -
Viun11g00983 1286 PRINTS Disease resistance protein signature 332 346 - -
Viun11g00983 1286 PRINTS Disease resistance protein signature 605 621 - -
Viun11g00983 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 396 IPR027417 -
Viun11g00983 1286 SMART AAA_5 161 302 IPR003593 GO:0016887
Viun11g00983 1286 Gene3D Ribonuclease Inhibitor 491 993 IPR032675 -
Viun11g00983 1286 Coils Coil 29 49 - -
Viun11g00983 1286 SUPERFAMILY L domain-like 491 862 - -
Viun11g00983 1286 Pfam NB-ARC domain 148 383 IPR002182 GO:0043531
Viun11g00983 1286 SUPERFAMILY L domain-like 881 1238 - -
Viun11g00983 1286 Gene3D Ribonuclease Inhibitor 1000 1228 IPR032675 -
Viun11g00983 1286 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1114 1249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00983 Viun-Chr11 20020428 20025366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00983 139 439 WRKY Transcription Factor Family AT5G45050 26.935 1.59e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00983 - - gmx:100814903 2043.85