Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00982 ATGTTGTTTACTTGTTTGTTATTCTTATCGTACTTGTGTAGAATTTCCAATTCACTAGATAGTTTAGCAGTAAGTCAATCCATCGAAGATGGTAAGACTTTGGTTTCTGCGCTTGGAATCACTGAAGTGGGTTTCTTTAGCCCAGGAAATTCAACACGACGATACTTGGGTATATGGTACACAAATGTATCCCCTGTCACAGTGGTGTGGGTGGCAAACCGAAACACGCCTCTTGAGAATAAATCAGGAGTTCTCAAACTCAATGAAAAAGGGATTCTTGTTCTTCTCAATGCTACAAACAACATCGTTTGGTCATCATCCAACATCTCGAGCAAAGCAGGGAATAATCCAATTGCTCAGCTCTTGGATTCGGGAAATTTTGTTGTTAAAAAGGGACAAGAAACCAATGAGGATGGCGTCTTGTGGCAGAGCTTTGATCATCCATGTGATACATTTATGCCAGGAATGAAAATTGGATGGAACTTAGAGACTGGTTTAGAAAAGTTTCTATCTTCTTGGAAAAGTTTTGATGATCCTGCTGTGGGAGAATATGCCGTAAAATTGAATCTCAGCGGATATCCTCAAATGATGAAGTTCAAGGGACCTGATAAAGTGTTTAGAGGTGGGTCATGGAATGGTTTATCTCTGGTGGCAAATCCTGGTCCAACCTACGGCACCTCACCAAGATTCGTGCTCAATGAAAAAGAGGTGTATTACGAATACGGGATTGAGGAGAGTTCAGGGTTTATCATATATACACTGACCCCTTCAGGCACAGGAGAAATATTGTTTTGGACAACTCAATCAAGAACACAGCAAGTTCTCTCAAGTGGGGAGCAAGATCAATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTATATGCAATTACGATGGTAATCACCCAAGTTGTGAATGCCTGAGAGGTTATGTTCCCAAGTCTCCGGAACAGTTGAATATATCAACTTGGCTCAGAGGTTGTGTTCCGAGGAATAAATCTAATTGCACAAATAGTCACACAGATCGGTTCTGGAAGTATACAAACATGAAATTGCCAGACACTTCTTCATCACGGTTTTATGAGACTATTAGCCTTGATGAATGTCAGCAGTCATGCATTATGAACTGTTCTTGTACAGGTTATGCAAGTTTAAATGTTCTTGATGGAGGTAGTGGCTGTCTACTTTGGTTTGATGATCTAGTTGACATGAGGAATTTCTCAAACTGGGGACAAGACTTCTATATCAGAGTCCCTGCTTCAGAACTAGATCATGGAAACGACAAGAAAAACATGGTAGGAATAATTGTTGGTGTCACTATTTTTGGATTCATCATCACATGTGTATGCATACTGGGAATTAAAAATCCAGAGGCTGCAAGAAAATTTTGCAACAAGCATTACAAAAATATGCAGAGGAGGGAAGTTATAGATTTGCCAACTTTCGATTTCTCAGTCTTAGCCAGTGCCACTGGAAACTTTTCAACCGAAAACAAGCTTGGAGAAGGGGGTTTTGGACCAGTATACAAGGGCACACTAATAGATGGGAAAGAGTTAGCTGTGAAAAGGCTTTCTCAGAAATCTCTGCAAGGGTTGGATGAGTTCAAAAATGAAGTTGCATTGATGACCAAACTTCAGCATCGTAATCTGGTAAAACTTCTTGGTTGCTGCATTGAAGAAGAAGAAAAAATGCTAATATATGAGTACATGCCCAATCACAGCTTGGACTACCTTATTTTTGGTAAAAGGAAGTTCTTAGATTGGCGTAAGCGTTTCAACATTATTAGTGGCATTGCTCGAGGACTCCTTTATCTTCACCAAGACTCTACGTTGAGGATTATTCATAGAGATCTAAAACCTAGTAATATTTTACTAGATGCGAATTTGGATCCCAAAATATCAGACTTTGGCTTGGCTCGATTGGTTTTGGGAGATCAAGTTGAGGCAAAAACGAATAGGGTTGCTGGAACATAA 1971 0.3988 MLFTCLLFLSYLCRISNSLDSLAVSQSIEDGKTLVSALGITEVGFFSPGNSTRRYLGIWYTNVSPVTVVWVANRNTPLENKSGVLKLNEKGILVLLNATNNIVWSSSNISSKAGNNPIAQLLDSGNFVVKKGQETNEDGVLWQSFDHPCDTFMPGMKIGWNLETGLEKFLSSWKSFDDPAVGEYAVKLNLSGYPQMMKFKGPDKVFRGGSWNGLSLVANPGPTYGTSPRFVLNEKEVYYEYGIEESSGFIIYTLTPSGTGEILFWTTQSRTQQVLSSGEQDQCENYAFCGANSICNYDGNHPSCECLRGYVPKSPEQLNISTWLRGCVPRNKSNCTNSHTDRFWKYTNMKLPDTSSSRFYETISLDECQQSCIMNCSCTGYASLNVLDGGSGCLLWFDDLVDMRNFSNWGQDFYIRVPASELDHGNDKKNMVGIIVGVTIFGFIITCVCILGIKNPEAARKFCNKHYKNMQRREVIDLPTFDFSVLASATGNFSTENKLGEGGFGPVYKGTLIDGKELAVKRLSQKSLQGLDEFKNEVALMTKLQHRNLVKLLGCCIEEEEKMLIYEYMPNHSLDYLIFGKRKFLDWRKRFNIISGIARGLLYLHQDSTLRIIHRDLKPSNILLDANLDPKISDFGLARLVLGDQVEAKTNRVAGT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00982 656 SUPERFAMILY Protein kinase-like (PK-like) 478 656 IPR011009 -
Viun11g00982 656 SMART ntp_6 338 417 IPR003609 -
Viun11g00982 656 Gene3D Phosphorylase Kinase; domain 1 455 568 - -
Viun11g00982 656 Pfam Protein kinase domain 494 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00982 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 457 568 - -
Viun11g00982 656 Gene3D - 14 145 IPR036426 -
Viun11g00982 656 Gene3D Transferase(Phosphotransferase) domain 1 569 656 - -
Viun11g00982 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Viun11g00982 656 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Viun11g00982 656 FunFam Os07g0541700 protein 569 656 - -
Viun11g00982 656 SMART blect_4 25 148 IPR001480 -
Viun11g00982 656 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 179 IPR036426 -
Viun11g00982 656 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 14 145 - -
Viun11g00982 656 CDD B_lectin 25 148 IPR001480 -
Viun11g00982 656 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Viun11g00982 656 Gene3D Hepatocyte Growth Factor 334 414 - -
Viun11g00982 656 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Viun11g00982 656 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 4 646 - -
Viun11g00982 656 Pfam PAN-like domain 335 403 IPR003609 -
Viun11g00982 656 SMART serkin_6 493 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00982 656 Pfam D-mannose binding lectin 67 174 IPR001480 -
Viun11g00982 656 ProSiteProfiles EGF-like domain profile. 279 316 IPR000742 -
Viun11g00982 656 CDD PAN_AP_plant 332 418 - -
Viun11g00982 656 ProSiteProfiles Protein kinase domain profile. 493 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00982 Viun-Chr11 19984439 19987537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00982 412 656 Receptor kinase-like Gene Family AT4G04500 50.388 6.09e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00982 Pkinase 2.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00982 - - gmx:100815430 1010.75