Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00971 ATGGGTATTATCCATGCTTTCGTGATTATATTTGCATGCATACTTGTTTTCCCACTAGAAATTTCAGGAGCAAATGATTCAATCAACGTGGTCCAGTCTCTGAGTGATGGGAATACTTTGGTATCAAAAGGTGGGAAGTTTGAAGTTGGGTTCTTCAGCCCTGGTAGTTCCCAGAAACGTTACTTGGGAATTTGGTACAAGAATATCCCAGTTAAGACGTATGTTTGGGTAGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGAATTTTAACAGTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGTTCTCTGGTTTGGCACACCAACAACTCTCACAAACAAGCACAGAATCCGGTTGTAGAAATGTTGGACAGTGGCAATCTTGTGATCAGAAACGAGGGGGAAACGAACCCAGAAGAGTATTTGTGGCAAAGCTTTGATTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACTGGTTTGGAACGGAAATATACTTCATGGAAGAGTCCAGATGATCCATCCCCAGGTGATGTGTCTCGTGTTTTGAAACTATATAGCTATCCTGAGGTTTACATGATGAGGGGTACACAAAAGTTGCTGAGGTATGGACCTTGGAATGGCGAATATTTCAGTGGAATGCCAGATCTACTGAATAACACCATTTTTGGTTTGAGTTTTGTCAGCAATGAAGAGGAGATTTACTACACCTATACCCTCGTCAATGATTCCGTCCCTTCCAGAACTGTTACAAACCAATCAGGTACTATTGTTCGTTATGTGTGGGTGGATGATGACAAAACATGGAAACCATACAGAACGTACCCGAAAGAGTTTTGCGACAATTATGACTCCTGTGGACCTAACGGATTATGTGTACGAACTCAATCACAACCTTGCAAATGTTTGAAAGGTTTCAGTCCAAAATCACAACAAAATTGGTACTCATCGGATTGGAGTGAAGGATGTGAGCGCAATAAAGCGTTGAATTGCAGCCATGATACGTTTGTCCTATTTGAAGGGCTGAAAGTTCCAGCCACCACAGTTACTTGGTTGAATAAGAGTATTGGCCTGAAGGAATGCAGAGTGAAATGTTTGAGTGATTGTTCTTGCATGGCCTATACTAATTCAGATATAAGAAATGGAGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAACAGATTGAAACTGGTGGGCAAGATCTGTATATCAGGATGAATGCTTCGGAGGCAGAACCTGGGCCAAGCAACAACACACGAACGATAGTTGCTTCAACCGTTGGTGCAATTTGTGGGGTTCTTATTCTTCTAAGTACGTATATTATTTTCAGGCTCCAGAAGAACAAAGCTGTAAATTCATTCACAGAAGATATAAGTAAAAGACATGTGGATGATCTGGATGTCCAATTATTTGATCTAGTAACGATTGCAAAGGCAACTAATAACTTCTCCAAAGAGAATATGATAGGAGAAGGTGGTTTTGGACATGTATACAAGGGAATAATCGACGGGAAAGAAATTGCTGTAAAGACTCTATCAAGAAGCTCATGGCAAGGTGTCACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAGCTTCAGCATCGGAATCTTATTAAACTTCTTGGTTGCTGCATTCAAGGACAAGAAAGAATGCTCATTTATCAGTACATGGAAAATGGCAGCCTAGACTCCCTTATTTTTGATGAGAAAAGAAGTAAATCTTTGGAATGGCCTCAACGGTTCCAAATAATTTGCGGAATTGCAAGGGGCCTTATGTACCTTCATCAAGATTCCCCACTGAGGATCATCCACAGAGATCTCAAAGCTAGTAACATCTTACTCGATAAAACGTTGAATCCGAAAATATCAGACTTTGGTGTGTCAAGATCTTTTGGAGTAGACCAATTTGAGGGAAGCACAAGTAGAGTAGTAGGGACCTGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTATTTTCTGAAAAATCTGACGTATTTAGCTTTGGCATTCTGGTGTTGGAGATTGTCTCTGGGAAGAGAAACAGAGGACTTTATCACACAGATAAGAGTCTTAACCTTGTTGCTCATTCATGGACATTATGGAAAGCGGGCAAGGCAATAGATTTGATTGCCTCAAACATGAACACACCATCGTGCGTTATATCTGAAGTACTGCGTTGTCTCCATGTCGGTCTTTTGTGTGTGCAACAGTACCCAGATGATAGGCCTACAATGATGTCTGTGATTTTAATGTTGGAGAGTCACATTGAATTGGCTGGGCCAAGAGAGCCTGGTTTCATTTCGAGAAGTGTGTTACCTGAAAAAGATTTAGGCTCACCTACGAAAGACACAAGTTCAACCAACGAAGTGACCATTACCGTGTTAGAGCCTCGATGA 2442 0.4148 MGIIHAFVIIFACILVFPLEISGANDSINVVQSLSDGNTLVSKGGKFEVGFFSPGSSQKRYLGIWYKNIPVKTYVWVANGANPINDSSGILTVNTTGNLVLTQNGSLVWHTNNSHKQAQNPVVEMLDSGNLVIRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGLERKYTSWKSPDDPSPGDVSRVLKLYSYPEVYMMRGTQKLLRYGPWNGEYFSGMPDLLNNTIFGLSFVSNEEEIYYTYTLVNDSVPSRTVTNQSGTIVRYVWVDDDKTWKPYRTYPKEFCDNYDSCGPNGLCVRTQSQPCKCLKGFSPKSQQNWYSSDWSEGCERNKALNCSHDTFVLFEGLKVPATTVTWLNKSIGLKECRVKCLSDCSCMAYTNSDIRNGGSGCVLWFGDLIDMKQIETGGQDLYIRMNASEAEPGPSNNTRTIVASTVGAICGVLILLSTYIIFRLQKNKAVNSFTEDISKRHVDDLDVQLFDLVTIAKATNNFSKENMIGEGGFGHVYKGIIDGKEIAVKTLSRSSWQGVTEFINEVNLTAKLQHRNLIKLLGCCIQGQERMLIYQYMENGSLDSLIFDEKRSKSLEWPQRFQIICGIARGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVSRSFGVDQFEGSTSRVVGTCGYMAPEYAVDGLFSEKSDVFSFGILVLEIVSGKRNRGLYHTDKSLNLVAHSWTLWKAGKAIDLIASNMNTPSCVISEVLRCLHVGLLCVQQYPDDRPTMMSVILMLESHIELAGPREPGFISRSVLPEKDLGSPTKDTSSTNEVTITVLEPR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00971 813 Gene3D - 20 149 IPR036426 -
Viun11g00971 813 SMART ntp_6 340 419 IPR003609 -
Viun11g00971 813 Gene3D Transferase(Phosphotransferase) domain 1 571 775 - -
Viun11g00971 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Viun11g00971 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 774 - -
Viun11g00971 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 459 570 - -
Viun11g00971 813 SMART serkin_6 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00971 813 MobiDBLite consensus disorder prediction 786 813 - -
Viun11g00971 813 Gene3D Phosphorylase Kinase; domain 1 470 570 - -
Viun11g00971 813 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00971 813 SUPERFAMILY Protein kinase-like (PK-like) 480 767 IPR011009 -
Viun11g00971 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Viun11g00971 813 Pfam Protein tyrosine and serine/threonine kinase 498 764 IPR001245 GO:0004672|GO:0006468
Viun11g00971 813 Pfam S-locus glycoprotein domain 211 319 IPR000858 GO:0048544
Viun11g00971 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 758 - -
Viun11g00971 813 CDD PAN_AP_plant 338 418 - -
Viun11g00971 813 CDD B_lectin 31 152 IPR001480 -
Viun11g00971 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Viun11g00971 813 MobiDBLite consensus disorder prediction 794 813 - -
Viun11g00971 813 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Viun11g00971 813 SMART blect_4 31 152 IPR001480 -
Viun11g00971 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 149 - -
Viun11g00971 813 ProSitePatterns Protein kinases ATP-binding region signature. 502 523 IPR017441 GO:0005524
Viun11g00971 813 Pfam PAN-like domain 340 405 IPR003609 -
Viun11g00971 813 Pfam D-mannose binding lectin 73 178 IPR001480 -
Viun11g00971 813 CDD STKc_IRAK 502 768 - -
Viun11g00971 813 ProSiteProfiles PAN/Apple domain profile. 340 421 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00971 Viun-Chr11 19452916 19457459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00971 422 781 Receptor kinase-like Gene Family AT4G23230 51.240 1.01e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00971 PK_Tyr_Ser-Thr 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00971 - - vra:106754325 1494.95