Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun11g00971 | ATGGGTATTATCCATGCTTTCGTGATTATATTTGCATGCATACTTGTTTTCCCACTAGAAATTTCAGGAGCAAATGATTCAATCAACGTGGTCCAGTCTCTGAGTGATGGGAATACTTTGGTATCAAAAGGTGGGAAGTTTGAAGTTGGGTTCTTCAGCCCTGGTAGTTCCCAGAAACGTTACTTGGGAATTTGGTACAAGAATATCCCAGTTAAGACGTATGTTTGGGTAGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGAATTTTAACAGTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGTTCTCTGGTTTGGCACACCAACAACTCTCACAAACAAGCACAGAATCCGGTTGTAGAAATGTTGGACAGTGGCAATCTTGTGATCAGAAACGAGGGGGAAACGAACCCAGAAGAGTATTTGTGGCAAAGCTTTGATTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACTGGTTTGGAACGGAAATATACTTCATGGAAGAGTCCAGATGATCCATCCCCAGGTGATGTGTCTCGTGTTTTGAAACTATATAGCTATCCTGAGGTTTACATGATGAGGGGTACACAAAAGTTGCTGAGGTATGGACCTTGGAATGGCGAATATTTCAGTGGAATGCCAGATCTACTGAATAACACCATTTTTGGTTTGAGTTTTGTCAGCAATGAAGAGGAGATTTACTACACCTATACCCTCGTCAATGATTCCGTCCCTTCCAGAACTGTTACAAACCAATCAGGTACTATTGTTCGTTATGTGTGGGTGGATGATGACAAAACATGGAAACCATACAGAACGTACCCGAAAGAGTTTTGCGACAATTATGACTCCTGTGGACCTAACGGATTATGTGTACGAACTCAATCACAACCTTGCAAATGTTTGAAAGGTTTCAGTCCAAAATCACAACAAAATTGGTACTCATCGGATTGGAGTGAAGGATGTGAGCGCAATAAAGCGTTGAATTGCAGCCATGATACGTTTGTCCTATTTGAAGGGCTGAAAGTTCCAGCCACCACAGTTACTTGGTTGAATAAGAGTATTGGCCTGAAGGAATGCAGAGTGAAATGTTTGAGTGATTGTTCTTGCATGGCCTATACTAATTCAGATATAAGAAATGGAGGTAGTGGTTGTGTCTTGTGGTTTGGAGATCTCATTGACATGAAACAGATTGAAACTGGTGGGCAAGATCTGTATATCAGGATGAATGCTTCGGAGGCAGAACCTGGGCCAAGCAACAACACACGAACGATAGTTGCTTCAACCGTTGGTGCAATTTGTGGGGTTCTTATTCTTCTAAGTACGTATATTATTTTCAGGCTCCAGAAGAACAAAGCTGTAAATTCATTCACAGAAGATATAAGTAAAAGACATGTGGATGATCTGGATGTCCAATTATTTGATCTAGTAACGATTGCAAAGGCAACTAATAACTTCTCCAAAGAGAATATGATAGGAGAAGGTGGTTTTGGACATGTATACAAGGGAATAATCGACGGGAAAGAAATTGCTGTAAAGACTCTATCAAGAAGCTCATGGCAAGGTGTCACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAGCTTCAGCATCGGAATCTTATTAAACTTCTTGGTTGCTGCATTCAAGGACAAGAAAGAATGCTCATTTATCAGTACATGGAAAATGGCAGCCTAGACTCCCTTATTTTTGATGAGAAAAGAAGTAAATCTTTGGAATGGCCTCAACGGTTCCAAATAATTTGCGGAATTGCAAGGGGCCTTATGTACCTTCATCAAGATTCCCCACTGAGGATCATCCACAGAGATCTCAAAGCTAGTAACATCTTACTCGATAAAACGTTGAATCCGAAAATATCAGACTTTGGTGTGTCAAGATCTTTTGGAGTAGACCAATTTGAGGGAAGCACAAGTAGAGTAGTAGGGACCTGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTATTTTCTGAAAAATCTGACGTATTTAGCTTTGGCATTCTGGTGTTGGAGATTGTCTCTGGGAAGAGAAACAGAGGACTTTATCACACAGATAAGAGTCTTAACCTTGTTGCTCATTCATGGACATTATGGAAAGCGGGCAAGGCAATAGATTTGATTGCCTCAAACATGAACACACCATCGTGCGTTATATCTGAAGTACTGCGTTGTCTCCATGTCGGTCTTTTGTGTGTGCAACAGTACCCAGATGATAGGCCTACAATGATGTCTGTGATTTTAATGTTGGAGAGTCACATTGAATTGGCTGGGCCAAGAGAGCCTGGTTTCATTTCGAGAAGTGTGTTACCTGAAAAAGATTTAGGCTCACCTACGAAAGACACAAGTTCAACCAACGAAGTGACCATTACCGTGTTAGAGCCTCGATGA | 2442 | 0.4148 | MGIIHAFVIIFACILVFPLEISGANDSINVVQSLSDGNTLVSKGGKFEVGFFSPGSSQKRYLGIWYKNIPVKTYVWVANGANPINDSSGILTVNTTGNLVLTQNGSLVWHTNNSHKQAQNPVVEMLDSGNLVIRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGLERKYTSWKSPDDPSPGDVSRVLKLYSYPEVYMMRGTQKLLRYGPWNGEYFSGMPDLLNNTIFGLSFVSNEEEIYYTYTLVNDSVPSRTVTNQSGTIVRYVWVDDDKTWKPYRTYPKEFCDNYDSCGPNGLCVRTQSQPCKCLKGFSPKSQQNWYSSDWSEGCERNKALNCSHDTFVLFEGLKVPATTVTWLNKSIGLKECRVKCLSDCSCMAYTNSDIRNGGSGCVLWFGDLIDMKQIETGGQDLYIRMNASEAEPGPSNNTRTIVASTVGAICGVLILLSTYIIFRLQKNKAVNSFTEDISKRHVDDLDVQLFDLVTIAKATNNFSKENMIGEGGFGHVYKGIIDGKEIAVKTLSRSSWQGVTEFINEVNLTAKLQHRNLIKLLGCCIQGQERMLIYQYMENGSLDSLIFDEKRSKSLEWPQRFQIICGIARGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVSRSFGVDQFEGSTSRVVGTCGYMAPEYAVDGLFSEKSDVFSFGILVLEIVSGKRNRGLYHTDKSLNLVAHSWTLWKAGKAIDLIASNMNTPSCVISEVLRCLHVGLLCVQQYPDDRPTMMSVILMLESHIELAGPREPGFISRSVLPEKDLGSPTKDTSSTNEVTITVLEPR | 813 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun11g00971 | 813 | Gene3D | - | 20 | 149 | IPR036426 | - | |
Viun11g00971 | 813 | SMART | ntp_6 | 340 | 419 | IPR003609 | - | |
Viun11g00971 | 813 | Gene3D | Transferase(Phosphotransferase) domain 1 | 571 | 775 | - | - | |
Viun11g00971 | 813 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 74 | 183 | IPR036426 | - | |
Viun11g00971 | 813 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 571 | 774 | - | - | |
Viun11g00971 | 813 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 459 | 570 | - | - | |
Viun11g00971 | 813 | SMART | serkin_6 | 496 | 767 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00971 | 813 | MobiDBLite | consensus disorder prediction | 786 | 813 | - | - | |
Viun11g00971 | 813 | Gene3D | Phosphorylase Kinase; domain 1 | 470 | 570 | - | - | |
Viun11g00971 | 813 | ProSiteProfiles | Protein kinase domain profile. | 496 | 773 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun11g00971 | 813 | SUPERFAMILY | Protein kinase-like (PK-like) | 480 | 767 | IPR011009 | - | |
Viun11g00971 | 813 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 616 | 628 | IPR008271 | GO:0004672|GO:0006468 | |
Viun11g00971 | 813 | Pfam | Protein tyrosine and serine/threonine kinase | 498 | 764 | IPR001245 | GO:0004672|GO:0006468 | |
Viun11g00971 | 813 | Pfam | S-locus glycoprotein domain | 211 | 319 | IPR000858 | GO:0048544 | |
Viun11g00971 | 813 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 9 | 758 | - | - | |
Viun11g00971 | 813 | CDD | PAN_AP_plant | 338 | 418 | - | - | |
Viun11g00971 | 813 | CDD | B_lectin | 31 | 152 | IPR001480 | - | |
Viun11g00971 | 813 | PIRSF | SRK | 1 | 813 | IPR024171 | GO:0004674 | |
Viun11g00971 | 813 | MobiDBLite | consensus disorder prediction | 794 | 813 | - | - | |
Viun11g00971 | 813 | ProSiteProfiles | Bulb-type lectin domain profile. | 25 | 146 | IPR001480 | - | |
Viun11g00971 | 813 | SMART | blect_4 | 31 | 152 | IPR001480 | - | |
Viun11g00971 | 813 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 21 | 149 | - | - | |
Viun11g00971 | 813 | ProSitePatterns | Protein kinases ATP-binding region signature. | 502 | 523 | IPR017441 | GO:0005524 | |
Viun11g00971 | 813 | Pfam | PAN-like domain | 340 | 405 | IPR003609 | - | |
Viun11g00971 | 813 | Pfam | D-mannose binding lectin | 73 | 178 | IPR001480 | - | |
Viun11g00971 | 813 | CDD | STKc_IRAK | 502 | 768 | - | - | |
Viun11g00971 | 813 | ProSiteProfiles | PAN/Apple domain profile. | 340 | 421 | IPR003609 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun11g00971 | Viun-Chr11 | 19452916 | 19457459 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun11g00971 | 422 | 781 | Receptor kinase-like Gene Family | AT4G23230 | 51.240 | 1.01e-115 | 363 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Viun11g00971 | PK_Tyr_Ser-Thr | 6.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun11g00971 | - | - | vra:106754325 | 1494.95 |