Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00934 ATGGCTTCTTTCACTTTTCTCTTTCTTTCAACCAATCTACTCCATTTGTTGCCTATAATTTCATCTGCAACTGACACCATTAATGTGTTGCAGCCCCTTCTTGATGGCAGTACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTTAGTCCAAATAATAGTACTAACACTACCACCAATCGGTACCTTGGCATATGGTACAGAAGTGTCCCAGTCAGAACCGTCGTTTGGGTTGCCAACCGTGAGAATCCAGTTAAGGATAACTCCAGCATGTGCAGCATAAACACAGACGGAAAACTGGTTATCCTCACCAATAACAATACTCTTGTTTGGTCAGCAAACTCAACTGAAGAAATCAAAGCGCAGAGTCCATTTGCTCAGCTGCTAGACTCAGGGAACTTGGTATTAAGAGATGAGAAGGATTCAAACCCGGAGAAATACTTGTGGCAGAGCTTTGACTACCCTTGTGATACTTTCCTGCCAGGAATGAAGATCGGATGGAACCTTAAGACAGGTCTTAACCGGCGTTTAACAGCATGGAAGAACTGGGATGACCCTTCTCCAGGCGACTTCATTTGGGGTATGGTGCTAGGTAACACTACTGAATTGGTTATGTGGAAAGGTACCAGTGAGTATTATAGGAGTGGCCCTTGGAATGGTGTTAGATTCAACGGAAAAACCACTCCCCTTTTTAACTTAGAGTTAGAGTCCACTGTTGATGAAGTGTATTACACATATAACATTGGGAATAAGTCTTTGATTACAAGAGTTGTTTTGAACCAATCTGTTTATTCTCGGCAGCGCTATAATTTGAATGTAGAGAACCAAACTTGGAAGCTCTATTCATCAGTTCCTAGAGACATTTGTGACACCTACAATCTTTGTGGTCCATATGGGAACTGTATTGTGAATGAGTCACCACCATGCCAGTGTTTAACCGGGTTCAAGCCAAAATCAGTTCAAAATTATGAGGCATTGGATTGGAGCCAAGGATGTGTTCTTAGTGAAGCGTGGAGTTGTGGAGTAAAAAAGAAAGATGGGTTTAAAAAATTCAGTGGGTTGAAAATGCCAGATACCACAAGTTCTTGGGTTGATGGAAATTTGACACTTGAGAATTGCAAGGCAAAGTGCTTGCTAAACTGTTCTTGCACTGCATATGCAAATTTAGATGTCAGGGGAGATGGTAAAGGCTGTATCATTTGGTATGGAGCTTTGCTTGATTTAAGGGTGGCTTCAGTTCCCGGGCAAGACCTATATATTCGAATGGTTGCCCCGGAAAATGGATGGGATAAGAAAATTGTAGCGGTGGTGATTCCTGTGTCTCTCCTTGCTTTTGTGGCTGTTTTCATTTTCATTTACTGGCGGAAAAGAAACCTTAGAGAGAAAACTTCAGAAGAAAATAAAGATGAAGGATGTGAAGAAGACTTAGAGCTTTCTTCCTTTGATTTTTCTACAATAGTTCGTGCCACAGATAACTTCTCAAGTGAAAAGAGACTTGGCCAAGGTGGTTTTGGACCTGTGTATTGGGGTGCCCTAGAAGATGGACAAGAGATTGCTGCCAAGAGGCTTTCTAACAGTACTGGACAAGGAGTGAAAGAATTCAAGAACGAAGTCATATTGTGTGCCAAACTTCAGCACCGAAATCTTGTAAAGGTTCTCGGTTGTTCCACTCAAGAAGGGGAAAGAGTGCTGGTCTATGAATACATGCCAAATAAAAGCCTGGATTCCTTTCTTTTCGATTCTTCCAAAAGTGGACTTCTGGACTGGTCTAAGCGATTCAATATTATATTTGGAATAGCTCGAGGACTTCTTTATCTTCATCAAGATTCTAGATTAAGAATAATTCACAGAGACATGAAAGCAAGCAATATTCTACTAGATAGCGAGTTAAATCCAAAAATTTCAGATTTTGGCGTCGCGCGAATGTTTACTGCAAATCAAACAGAAGAGAATACAAAAATGGTGGTTGGAACATATGGATACATGGCACCAGAATACGCAATTGATGGGCTGTTCTCTGTGAAATCCGACGTATACAGCTTTGGGGTACTGTTACTAGAGATAGTAAGTGGGAAGAAAAACAGAGGAATGTTCTTTCCAGATCACGGACTTAATCTATTAGGACATGCTTGGAGATTATGGAAAGAAAGCTCTCCGATGAAATTAGTTGATGCTGCTTTGGGCGACACCTTTACTGTTTCTGAAGTACTACGATGCATACATGTTGGTCTTTTATGTGTGCAACTATATCCAGAGGATAGGCCAAACATGGCATCAGTTATTTTTATGTTGAGCAGTGAAAATACTTTGCCACAACCTAAGGAACCTGGTTTCCTTATTGAAAGGACGAACACTGCAGGAGAATGTTCAACAAGCAATGAAGTGAAGACTTCCACTAATGAATTAACTGTAACCCTACTAGAGGCTAGGTAG 2439 0.4092 MASFTFLFLSTNLLHLLPIISSATDTINVLQPLLDGSTLVSKDGTFEMGFFSPNNSTNTTTNRYLGIWYRSVPVRTVVWVANRENPVKDNSSMCSINTDGKLVILTNNNTLVWSANSTEEIKAQSPFAQLLDSGNLVLRDEKDSNPEKYLWQSFDYPCDTFLPGMKIGWNLKTGLNRRLTAWKNWDDPSPGDFIWGMVLGNTTELVMWKGTSEYYRSGPWNGVRFNGKTTPLFNLELESTVDEVYYTYNIGNKSLITRVVLNQSVYSRQRYNLNVENQTWKLYSSVPRDICDTYNLCGPYGNCIVNESPPCQCLTGFKPKSVQNYEALDWSQGCVLSEAWSCGVKKKDGFKKFSGLKMPDTTSSWVDGNLTLENCKAKCLLNCSCTAYANLDVRGDGKGCIIWYGALLDLRVASVPGQDLYIRMVAPENGWDKKIVAVVIPVSLLAFVAVFIFIYWRKRNLREKTSEENKDEGCEEDLELSSFDFSTIVRATDNFSSEKRLGQGGFGPVYWGALEDGQEIAAKRLSNSTGQGVKEFKNEVILCAKLQHRNLVKVLGCSTQEGERVLVYEYMPNKSLDSFLFDSSKSGLLDWSKRFNIIFGIARGLLYLHQDSRLRIIHRDMKASNILLDSELNPKISDFGVARMFTANQTEENTKMVVGTYGYMAPEYAIDGLFSVKSDVYSFGVLLLEIVSGKKNRGMFFPDHGLNLLGHAWRLWKESSPMKLVDAALGDTFTVSEVLRCIHVGLLCVQLYPEDRPNMASVIFMLSSENTLPQPKEPGFLIERTNTAGECSTSNEVKTSTNELTVTLLEAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00934 812 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 757 - -
Viun11g00934 812 CDD PAN_AP_plant 341 423 - -
Viun11g00934 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Viun11g00934 812 Gene3D Transferase(Phosphotransferase) domain 1 571 777 - -
Viun11g00934 812 Gene3D Phosphorylase Kinase; domain 1 456 570 - -
Viun11g00934 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Viun11g00934 812 Pfam PAN-like domain 342 410 IPR003609 -
Viun11g00934 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 570 - -
Viun11g00934 812 Pfam Domain of unknown function (DUF3403) 767 812 IPR021820 GO:0004674
Viun11g00934 812 SMART serkin_6 495 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00934 812 Gene3D Hepatocyte Growth Factor 341 416 - -
Viun11g00934 812 Pfam S-locus glycoprotein domain 215 321 IPR000858 GO:0048544
Viun11g00934 812 Pfam D-mannose binding lectin 76 183 IPR001480 -
Viun11g00934 812 SMART ntp_6 345 424 IPR003609 -
Viun11g00934 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 154 - -
Viun11g00934 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 188 IPR036426 -
Viun11g00934 812 CDD B_lectin 31 157 IPR001480 -
Viun11g00934 812 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Viun11g00934 812 CDD STKc_IRAK 501 766 - -
Viun11g00934 812 Gene3D - 18 154 IPR036426 -
Viun11g00934 812 Pfam Protein tyrosine and serine/threonine kinase 497 696 IPR001245 GO:0004672|GO:0006468
Viun11g00934 812 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00934 812 SMART blect_4 30 157 IPR001480 -
Viun11g00934 812 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Viun11g00934 812 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 774 - -
Viun11g00934 812 SUPERFAMILY Protein kinase-like (PK-like) 479 774 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00934 Viun-Chr11 16235896 16239420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00934 427 783 Receptor kinase-like Gene Family AT4G23230 53.073 6.03e-130 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00934 PK_Tyr_Ser-Thr 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00934 - - gmx:100790436 993.801