Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00932 ATGGTTTGTTACACTTTTCTGTTTGTTTTGGCCGAACTAAGCATGTTGTTCCCTTCAATTTCGTCTGCAACTGATACCTTTAACGGGTCGCAGTCCCTTCCCGATGGCGCAACCTTGGTGTCAGAAGATGGAACATTTGAAATGGGTTTCTTCAGTCCAAGCAACAGTAACACAACTACAAATCGCTACCTTGGAATATGGTACAAAAGTATCCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAACTCCAGCAAGTTGAGCATAAGCACACAAGGAAAACTAGTGATCCTCAGCAATAACAATACTCTCGTTTGGTCAGCGCATACAACTGAAGAAACAAAATCACAGAGTATAATTGTTCAGCTTTTGAACTCAGGGAACTTGGTGGTAAGAGATGAGAAAGATTCAAGTCCACAGAATTTCTTTTGGGAAAGCTTTGACTATCCTTGTGATACTTTTCTTCCAGGAATGAAGATTGGATGGAACCTTAAGAAGGGTCTCATCTGGCGATTTACCGCGTGGAAGAACTGGGATGACCCTTCTCCAGGGAACTTCAGTTGGGGTATGGAGCTTGGTAACACTCGTGAACTGGTTATGTGGAAAGGTTCTAGTGAGTATTATAGAAGTGGCCCTTGGAATGGTGTCAGATTCAGTGGCAAATACACTCCCCGTTACAACTTAGAATTTAATTCCACTCCTGATGAAGTGTATTATACATACAAATTTGCGAGCAATTCAATTATTACAAGGGTTGTTTTGAACCAATCCCTTTATTCTCGGCACCGCTATAATTGGATTACTCAGAACCAAACTTGGAGTCTTTATTCCGTTGTTCCCATAGACAAATGTGATAGCTTCAATGTTTGTGGCCCCTATGGGAGTTGTAATGGTGGTGAACCATTGCACTGCGAGTGTTTAATGGGGTTCAAACCAAAATCAGTACAAAATTATGAGGCATTGGATTCGAGTCAGGGATGTGTGCCTAGTGGACCGTGGGGCTGTGGTAAAACAGACAATGATTTTCAAAAATTTAGTGGCTTGAAATTGCCGGATACTACAAGGTCTTGGATTCATCCAAATTTGACTCTCGAGAGTTGCAAGGCCAAATGCTTGCAAAATTGTTCTTGCATAGCATATGCAAACTTGGATATCAGAGATGGTAGTGGTTGTATCATTTGGTATGAAGCTTTGGTGGATTTAACGTTGGCTTCACTCCCGGGGCCAGATCTATATATTCGAAGGACTGCTTCAGAAATAGAGAAGGCATCAGAAGAAAGTAAAAGTGAAAGCAGTGAAGGAGACTTAGATCTTCCTTTCTTTGATTTTCCTACAATAGTTCGTGCCACCAACGATTTCTCAAGAGACAAGATGCTTGGCCAAGGTGGTTTTGGACCTGTGTATAGGGGTACACTCGCAGATGGACAAGAGATCGCTGCCAAGAGGCTTTGTAGTAATACTGGCCAAGGAATGAAAGAATTCAAGAATGAAGTTATATTGTGTGCCAAACTACAGCACCGGAATCTTGTAAAGCTTCTCGGTTGTTCCATTGAAGGAGAGGAGAAAATTTTGGTCTACGAATACATGCCCAATAAAAGCTTGGACTACTTTCTCTTTGATTCTTCCAGAAAAGGAATCCTAAACTGGTCAAAGCGGTTGAACATTATACATGGCATTGCTCGTGGACTTCTATATCTTCACCAAGATTCTAGATTAAGAATCATTCATAGAGATATGAAAGCGAGTAATATCCTGTTAGACAATGAGCTGAATCCAAAAATTTCTGATTTTGGTATAGCACGAATGTTTAGAGGGAATCAAACGGAAGGAAATACGAAACAAGTTGTTGGAACATATGGGTACATGGCACCAGAATACACAATAAATGGACTGTTCTCAATCAAATCTGATGTATACAGTTTTGGAATACTGCTACTAGAGATAGTAAGTGGCAAGAGAAATGGAGGAATTTTCTTTCCAGATCACGGACATAATCTATTAGAACATGCTTGGAGATTTTGGAAAGGGGACACTCCTATGAAATTAGTTGATACTTCTTTGGATGACTGCTTTAACACTTCAGAAGCATTACGCTGCATTCATGTTGGTCTTCTTTGTGTGCAACTACATCCAGAGAATAGGCCAAATATGGCATCGGTGATTTTTATGTTGAGTGGTGAAAATATTTTGCCAGAACCCAAGGAACCTGGGTTTCTTATTGCAAGGATGAAAACTGCCGGCGAATGCTCAACTAGCAATGCAATTAAGACTTCCACCAATGAATTAACTATAACCCTGCCACAACCTAGGTAA 2331 0.4076 MVCYTFLFVLAELSMLFPSISSATDTFNGSQSLPDGATLVSEDGTFEMGFFSPSNSNTTTNRYLGIWYKSIPVRTVVWVANRENPVKDNSSKLSISTQGKLVILSNNNTLVWSAHTTEETKSQSIIVQLLNSGNLVVRDEKDSSPQNFFWESFDYPCDTFLPGMKIGWNLKKGLIWRFTAWKNWDDPSPGNFSWGMELGNTRELVMWKGSSEYYRSGPWNGVRFSGKYTPRYNLEFNSTPDEVYYTYKFASNSIITRVVLNQSLYSRHRYNWITQNQTWSLYSVVPIDKCDSFNVCGPYGSCNGGEPLHCECLMGFKPKSVQNYEALDSSQGCVPSGPWGCGKTDNDFQKFSGLKLPDTTRSWIHPNLTLESCKAKCLQNCSCIAYANLDIRDGSGCIIWYEALVDLTLASLPGPDLYIRRTASEIEKASEESKSESSEGDLDLPFFDFPTIVRATNDFSRDKMLGQGGFGPVYRGTLADGQEIAAKRLCSNTGQGMKEFKNEVILCAKLQHRNLVKLLGCSIEGEEKILVYEYMPNKSLDYFLFDSSRKGILNWSKRLNIIHGIARGLLYLHQDSRLRIIHRDMKASNILLDNELNPKISDFGIARMFRGNQTEGNTKQVVGTYGYMAPEYTINGLFSIKSDVYSFGILLLEIVSGKRNGGIFFPDHGHNLLEHAWRFWKGDTPMKLVDTSLDDCFNTSEALRCIHVGLLCVQLHPENRPNMASVIFMLSGENILPEPKEPGFLIARMKTAGECSTSNAIKTSTNELTITLPQPR 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00932 776 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 423 534 - -
Viun11g00932 776 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Viun11g00932 776 ProSiteProfiles Protein kinase domain profile. 459 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00932 776 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Viun11g00932 776 Gene3D Phosphorylase Kinase; domain 1 420 534 - -
Viun11g00932 776 Gene3D Transferase(Phosphotransferase) domain 1 535 736 - -
Viun11g00932 776 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 721 - -
Viun11g00932 776 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Viun11g00932 776 CDD B_lectin 30 156 IPR001480 -
Viun11g00932 776 Pfam S-locus glycoprotein domain 214 320 IPR000858 GO:0048544
Viun11g00932 776 Pfam Protein tyrosine and serine/threonine kinase 462 676 IPR001245 GO:0004672|GO:0006468
Viun11g00932 776 Pfam D-mannose binding lectin 75 182 IPR001480 -
Viun11g00932 776 CDD STKc_IRAK 465 730 - -
Viun11g00932 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Viun11g00932 776 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Viun11g00932 776 SMART serkin_6 459 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00932 776 SUPERFAMILY Protein kinase-like (PK-like) 444 745 IPR011009 -
Viun11g00932 776 SMART ntp_6 343 421 IPR003609 -
Viun11g00932 776 Pfam PAN-like domain 341 407 IPR003609 -
Viun11g00932 776 CDD PAN_AP_plant 341 420 - -
Viun11g00932 776 PIRSF SRK 419 776 IPR024171 GO:0004674
Viun11g00932 776 PIRSF SRK 1 442 IPR024171 GO:0004674
Viun11g00932 776 SMART blect_4 30 156 IPR001480 -
Viun11g00932 776 Gene3D - 19 153 IPR036426 -
Viun11g00932 776 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 535 738 - -
Viun11g00932 776 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00932 Viun-Chr11 16176030 16179487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00932 447 776 Receptor kinase-like Gene Family AT4G11530 55.193 5.68e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00932 PK_Tyr_Ser-Thr 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00932 - - qsu:112024700 902.123