Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00927 ATGGCAATTCCACTACCTTCCACGCTTGTCATCATAGCCAGTCTGTTTCTCCTCTCATCAAAAATTTCATCTGAAACCAACACCATCACTCAGCTTCAGCCACTTATCTATGGAACCAACTTGGTTTCTGAGGGAGGAACCTTCGAGTTAGGTTTCTTCAGCCTAGGTACTTCAACAAACCTCTACCTAGGAATATGGTTCAAAAACATCCCACAAAAAACCATTGTTTGGGTTGCCAACCGCAACAATCCAATCAATAATACCATGAACAGAAACAACTCCACCGAGTTAACCTTAACCAAAGAAGGAAACCTGGTTCTTCTCAGCAGCAACAACACCGTTCACTGGTCAACAAATGCAACAACAAAATCTAAATCGGTCAACGCCGTAGCACGGCTATTGGAAACCGGGAACTTTGTCCTTAAAGATGAAAACGACAATAATTCTGAAAACTACTTGTGGCAAAGCTTTGACTATCCTTCGGACACACTTTTACCAGGAATGAAGCTAGGGTGGGAAGTAGCAACAGGTCTCAACAGATTCATCACTTCTTGGAACAATTGGGAAGACCCATCTTCTGGTCATTATTCTTATGGAGTTTCAAGAGGCAACATCCCAGAAATGCAAATTTGGAACGGTTCATCAGTGTCCTACCGAAGTGGCCCTTGGAGTGGATTTCGATTCAGCGCCACACCGGCATTGAAGCGTCGTCCATTGGTGAATATCAACTTCGTTGACAATCCTAGGGAAAGTTATTACCAAGTTTTTCCGCGAAATAGTTCGATGCTTCTGAGAACGGTGATTAACCAAACGGCTAACGCTCTTCTGCGTTTCATTTGGGACGAAGATAATCAAAACTGGAGGCTTGATTTAGTTATCCCAAGAGACGGTTTTTGCGGCTATAACTACTGTGGCTCTTTCGGGTACTGTGCAGTCGCGGGCAACACTTCAACTTGCGAGTGTTTACGAGGGTTTCGGCCAAAATCGCCGGAAGAGTGGAGTGCAAAGATTTGGAATGAAGGGTGCGTGAATAGCACTGATACGTGGAGGTGTAGGGTGAAGAACAAAGACGGCTTCGTTAAGGTCAGTAACATGAAGATTCCCGACACTAAAACATCGTGGATGAATCGAACTATGACAATTGATGAATGCAAGGCTAAGTGTTGGGCGAATTGTTCGTGCACGGCTTATGCTAATTCGGATATCACTGAAAATGGAAGTGGTTACAGCGGTTGCATCATCTGGTTCGGTGATCTATTGGATTTGAGATTGCTTCCTGATGCAGGGCAAGATCTATATGTCAGATTGGATATCTCCAAAATTGAAAATAAAAATGATTCAAAGAAAGTGGTGATTGGGGTCATAAGCTCAGTTTCATTAATTCTTGCGGTGCTTGTAATATTCACATTCCTTTACCAGAGAAGAAAAGATAAAGATAAAAAAGCAAAGATAAACGGGAGTGAAGATGATCTAGAGCTACCTTTGTTTGATTTTGATACAATAGCATGTGCTACTAATGACTTCTCAGATGACCACATGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAAAGGGACATTATCAGATGGAAAGAATATTGCAGTGAAAAGGCTCTCTGATACATCCGCACAAGGACTCAAGGAATTTAAGAATGAAGTTATATTTTGTTCCAAACTTCAACATCGGAATCTTGTCAAAGTACTTGGATATTGCATTGAAGAACAAGAAAAATTGCTCATTTATGAATACATGCCAAACAAAAGCTTAAACTTCTTTCTTTTTGATAACTCTCAAAGCAAGCTCTTAGATTGGTCTACACGATTAAATATTATAACTGGAATTGCTCGAGGACTCCTTTATCTTCATCAAGATTCTAGATTAAGAATCATACATAGAGATTTAAAATCAAGCAATATCTTATTAGACGATGATATGAATCCAAAGATTTCTGATTTTGGATTAGCAAGAGGAGGTAGAGGTGATCAGATTGAAGGGAATACAAGGAGAGTTGTGGGTACATATGGTTATATGGCTCCTGAATATGCAATTGGTGGAGTATTCTCGGTCAAATCTGATGTTTATAGCTTTGGGGTTTTATTATTAGAGGTTTTAAGCGGAAAGAAAAATAAAGGATTTTCCTACTCAATCCACAACTATAACCTTATTGAACATGCATGGCGGTGTTGGAAAGAGAGCATCCCAATTGAATTCATCGATACTTGTTTAAGGGACTCATACATTCTATCGGAAGCCTTACGTTGTATTCATATTGGTCTTTTATGTATACAACATCAACCTAATGATAGACCGAATATGACTTCAGTACTTACAATGTTAACGAGTGAAAGTACTTTACCACAACCAGAAAAACCTGTTTTCTTAATGGAAAGGGTTTTAGTTGAGGAAGATGTAGGACAAAATATGTATTGTCCAACAAATGAAGTAACTATTTCAGAGATGGAACCAAGATAA 2472 0.3968 MAIPLPSTLVIIASLFLLSSKISSETNTITQLQPLIYGTNLVSEGGTFELGFFSLGTSTNLYLGIWFKNIPQKTIVWVANRNNPINNTMNRNNSTELTLTKEGNLVLLSSNNTVHWSTNATTKSKSVNAVARLLETGNFVLKDENDNNSENYLWQSFDYPSDTLLPGMKLGWEVATGLNRFITSWNNWEDPSSGHYSYGVSRGNIPEMQIWNGSSVSYRSGPWSGFRFSATPALKRRPLVNINFVDNPRESYYQVFPRNSSMLLRTVINQTANALLRFIWDEDNQNWRLDLVIPRDGFCGYNYCGSFGYCAVAGNTSTCECLRGFRPKSPEEWSAKIWNEGCVNSTDTWRCRVKNKDGFVKVSNMKIPDTKTSWMNRTMTIDECKAKCWANCSCTAYANSDITENGSGYSGCIIWFGDLLDLRLLPDAGQDLYVRLDISKIENKNDSKKVVIGVISSVSLILAVLVIFTFLYQRRKDKDKKAKINGSEDDLELPLFDFDTIACATNDFSDDHMLGQGGFGPVYKGTLSDGKNIAVKRLSDTSAQGLKEFKNEVIFCSKLQHRNLVKVLGYCIEEQEKLLIYEYMPNKSLNFFLFDNSQSKLLDWSTRLNIITGIARGLLYLHQDSRLRIIHRDLKSSNILLDDDMNPKISDFGLARGGRGDQIEGNTRRVVGTYGYMAPEYAIGGVFSVKSDVYSFGVLLLEVLSGKKNKGFSYSIHNYNLIEHAWRCWKESIPIEFIDTCLRDSYILSEALRCIHIGLLCIQHQPNDRPNMTSVLTMLTSESTLPQPEKPVFLMERVLVEEDVGQNMYCPTNEVTISEMEPR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00927 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 770 - -
Viun11g00927 823 Gene3D - 20 157 IPR036426 -
Viun11g00927 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Viun11g00927 823 ProSiteProfiles Bulb-type lectin domain profile. 26 154 IPR001480 -
Viun11g00927 823 Gene3D Hepatocyte Growth Factor 350 423 - -
Viun11g00927 823 Pfam Protein tyrosine and serine/threonine kinase 512 778 IPR001245 GO:0004672|GO:0006468
Viun11g00927 823 Pfam D-mannose binding lectin 74 185 IPR001480 -
Viun11g00927 823 SMART blect_4 32 160 IPR001480 -
Viun11g00927 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 191 IPR036426 -
Viun11g00927 823 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00927 823 CDD STKc_IRAK 514 780 - -
Viun11g00927 823 CDD PAN_AP_plant 354 436 - -
Viun11g00927 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 583 - -
Viun11g00927 823 SMART ntp_6 354 436 IPR003609 -
Viun11g00927 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Viun11g00927 823 Gene3D Phosphorylase Kinase; domain 1 468 583 - -
Viun11g00927 823 Pfam S-locus glycoprotein domain 218 329 IPR000858 GO:0048544
Viun11g00927 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 157 - -
Viun11g00927 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Viun11g00927 823 SMART serkin_6 508 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00927 823 Gene3D Transferase(Phosphotransferase) domain 1 584 790 - -
Viun11g00927 823 SUPERFAMILY Protein kinase-like (PK-like) 492 779 IPR011009 -
Viun11g00927 823 Pfam PAN-like domain 351 422 IPR003609 -
Viun11g00927 823 CDD B_lectin 41 160 IPR001480 -
Viun11g00927 823 ProSiteProfiles PAN/Apple domain profile. 351 437 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00927 Viun-Chr11 15889598 15894221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00927 474 823 Receptor kinase-like Gene Family AT4G11530 53.315 7.01e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00927 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00927 - - pvu:PHAVU_011G152100g 1337.01