Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00910 ATGGATAGCACCGAAGACTCGTCAACGAGTTCACAACAACAACCGAACCTCCCACCCGGGTTTCGGTTCCACCCCACAGACGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAAGTTGATTCTGTTCCTCTCCCTGTTTCAATCATCGCTGATGTTGATCTCTACAAGTTTGATCCATGGGAATTACCAGCTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTTTTCAGTCCGAGAGATAGGAAGTACCCAAATGGCGCGAGGCCAAACAGGGCTGCAACTTCAGGGTACTGGAAGGCGACGGGCACAGATAAACCCATATGCAGTGGAACTCAAAAGGTTGGTGTGAAGAAATCTTTGGTTTTCTACGGAGGAAAGCCACCAAAAGGGGTGAAAACCGATTGGATCATGCATGAGTATCGTCTCGCTGAAACCAAGCCTAACAACAGACCACCTGGGTGTGACTTGGGCCACAAGAAAAACTCCCTAAGGCTGGATGATTGGGTGTTGTGCCGGATCTACAAGAAGGGGAACACACAAAGGTCAGCTATGGAGCATGAGAGGGATGATTCCATGGATGACATGATTGGAGAAGTACCTTCTTCCATGAACGTGGGCCACATGAATGCGAGATTTCACCTTTCAAAGATGTCTACCAGCTACAGTGGTGCATTGTTGGAAAATGACAGAAACACGTTAGAAGGGGTGGTTATAGGCAATGGTGTGAATGGAATCAGCACTACTACAAGTGCCATGCCATCTCACTTTGGCACTTCAAACTCCAAGCCAGATCACCTTCCTTTTGCCCTTTCAAACAACGCTTCAGCCTCCAAAAGAACACTCTCAACACTCTATAACTGGAACCACGACACTGATCAAAAACACTTCAATTTGGACAATAATGGTAATGTGAGTGTTGTGAGGACTGAAGAAGACAACAATGCTTCTCCTGGCTCCTTTGCTACTCTGCTTAACCAGCTCCCACAAACACCTTCATTGCCTCAAATAGGGTCTATGGGAGATGGGTTACTTAGGACACAATACCAAATACAAGGGACTAATTGGTACGGCTAA 1074 0.4683 MDSTEDSSTSSQQQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPICSGTQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRLAETKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNTQRSAMEHERDDSMDDMIGEVPSSMNVGHMNARFHLSKMSTSYSGALLENDRNTLEGVVIGNGVNGISTTTSAMPSHFGTSNSKPDHLPFALSNNASASKRTLSTLYNWNHDTDQKHFNLDNNGNVSVVRTEEDNNASPGSFATLLNQLPQTPSLPQIGSMGDGLLRTQYQIQGTNWYG 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00910 357 PANTHER NAC TRANSCRIPTION FACTOR 56 17 218 - -
Viun11g00910 357 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Viun11g00910 357 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Viun11g00910 357 FunFam NAC transcription factor 56 26 181 - -
Viun11g00910 357 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Viun11g00910 357 MobiDBLite consensus disorder prediction 1 22 - -
Viun11g00910 357 Gene3D NAC domain 26 181 IPR036093 GO:0003677|GO:0006355
Viun11g00910 357 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00910 Viun-Chr11 14743567 14745919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00910 1 356 NAC Transcription Factor Family AT3G15510 52.162 2.95e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun11g00910 NAM 1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00910 - - gmx:100811670 599.742