Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00866 ATGAGTTTGAGTATGAGTTTCTGTGGTAGTTGCAGTCTTCAGTTTCCATGTCGCAGAATTACAAGCTGCAATCTTCACAAGGATGGCAGCCATGTTGTTCCCTTCAATACGCATCAAAAGCCTTCGGAGCCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGCATTGGAGTCATGACAGCGGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTGGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCTAATGAAGCTGTTCAGGGCCAATTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCACTGACCCTTGGTTACATCGGTGCATTTGGCTCTGGCAAAAGCAGAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGCCAAGGATTACCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGTCTCAATCTTCTCGAGATAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCAGCTGCCAATTTTCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCAACTCTTCTGGGATATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGAAGCTTGCTTTTGACATACACAACTGGTTACGTTTCTCCCTTACTCTTGGCTGCAACTTTTGCTGGAGCGTTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAGGCTGTTCCCAGCTACAATGGTGATGTAG 1035 0.4522 MSLSMSFCGSCSLQFPCRRITSCNLHKDGSHVVPFNTHQKPSEPKNCLQPKWKINGNNLTTCIGVMTAAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAATFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00866 344 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 118 343 - -
Viun11g00866 344 Pfam Cytochrome C biogenesis protein transmembrane region 128 334 IPR003834 GO:0016020|GO:0017004
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00866 Viun-Chr11 13429016 13433323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00866 1 344 Chloroplast and Mitochondria Gene Families AT5G54290 68.579 8.25e-143 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00866 - - pvu:PHAVU_011G155100g 632.098