Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00865 ATGAGTTTGAGTATGAGTTTCTGTGGTAGTTGCAGTCTTCAGTTTCCATGTCGCAGAATTACAAGCTGCAATCTTCACAAGGATGGCAGCCATGTTGTTCCCTTCAATACGCATCAAAAGCCTTCGGAGCCTAAAAATTGTCTTCAGCCAAAATGGAAGATTAATGGCAATAACTTGACCACATGCATTGGAGTCATGACAGCGGCACACTTGGTTGCTCCAGTTGCTGCAAAAGCTGAAGTGGCTTCTTCTATTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCTAATGAAGCTGTTCAGGGCCAATTATCATCTCTCAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTCTCTCCCTGTACACTTAGTGTCTTACCACTGACCCTTGGTTACATCGGTGAGCATGCTGCTGTTGCCATTTTTAATATTACTGTTTATTTTAGTTGCCTAAGTTTGTTGTGTGGAAATATTTCAGGTGCATTTGGCTCTGGCAAAAGCAGAGCAGAGGTAGTTGGAGATTCCATTGCGTTTTCCTTGGGTCTTGCAACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAAGCTTATGGACAAATTGGCCAAGGATTACCCTTGGCTGCTTCTGGTTTGGCAATAATTATGGGTCTCAATCTTCTCGAGATAATTGAATTACGGCTGCCGTCATTCTTTGACAGTTTTGATCCACGTGCAGCAGCTGCCAATTTTCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTGGCAACTCTTCTGGGATATGTTGCTGCATCCAAGGATCCTGTGATTGGAGGAAGCTTGCTTTTGACATACACAACTGGTTACGTTTCTCCCTTACTCTTGGCTGCAACTTTTGCTGGAGCGTTACAAAGCTTGCTTTCATTTCGCAAGTTTTCAGCATGGATAAATCCTATAAGCGGAGCAATGTTGTTAGGTGGTGGTGTATATACTTTCTTGGATAGGCTGTTCCCAGCTACAATGGTGATGTAG 1113 0.4438 MSLSMSFCGSCSLQFPCRRITSCNLHKDGSHVVPFNTHQKPSEPKNCLQPKWKINGNNLTTCIGVMTAAHLVAPVAAKAEVASSIYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGEHAAVAIFNITVYFSCLSLLCGNISGAFGSGKSRAEVVGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSLLLTYTTGYVSPLLLAATFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00865 370 Pfam Cytochrome C biogenesis protein transmembrane region 169 360 IPR003834 GO:0016020|GO:0017004
Viun11g00865 370 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 118 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00865 Viun-Chr11 13428920 13433323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00865 1 370 Chloroplast and Mitochondria Gene Families AT5G54290 64.031 7.03e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00865 - - pvu:PHAVU_011G155100g 617.846