Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00863 ATGTGGAGTCTCCTTATGTGGCACTTTCTTCCAGTGATTCATCTGGGAAGGTTTGGGAATTGGATGGTGATGATAGCATATCTTATTTCAGCAAAAAGGCAACCAAGAGGGCAGTGGGAACTAGGAATGGTCCAATCAACTTCAGGAGAGGAAGCATTCGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGACAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAGGATGTGGATGATCTAATTAAACTTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAATTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAGTTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGTATGGAAATAAATATGTCTCAGCCTGTAGCCAGAGAACTATGAATAGTCCTCATGTTTATGCTACGGTAGATGCAGCTTATAACAAGATGATGAGAGATGAAGTAAATCAGTCTATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGTGGTGGTAATTGTGCCATAGAAAATGAATTTCTTCAGATAAATCGTATTTTGGAGGCTTTTGGGAATGCAAAAACAGCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTTACTTTGGCTGCACGGGTAAAATATGTGGGGCTAAAATTCAGACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAACTTGCCCGTGATGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAAACTGAATCTTAGAGCAGTAAGTGAATATAAGTATCTAGTTCAGAGTGACTGCATGTCAATTGATGGTGTTGATGATGCCAAAAACTTTGATCAGCTGATGGAAGCACTGGATGCAGTTCAAATCTATAAAGAGGATCAGGAGCTGATCTTTAAGATACTTGCTGCAATACTCTGGTTGGGAAATATATCATTCCAAGTAGACAGAGACAATCAGATTGAGGTTGTTGACGATGAAGCTGTAAACAGTGCTGCCCAACTCATGGGTTGCAGTTCCCAGGATTTAATGACAGCATTATGTACCCATAAAATCCAAGCTGATGAAGATACTATTGAAAAAAAATTGACATTGAAGCAGGCAATTGAAAGAAGAGATGCTATTGCAAAGTTTATCTATGCAAGCTTGTTTAACTGGCTCTTAGACCAAGTTAACAAGTCACTTGAAGCGGGTAAAAAATGTACATGGAAATCCATAAGTATCCTCGATTTTTATGGGTTTCAGACTTTCCAGAAAAATGGCTTTGAGCAGTTTTACATAAATTATGCCAATGAAAGGATTCAACAACACTATAATCGCCATCTGTTTAAACTAGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCAAACGTTTCTGATTTGACATTTGCGAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCCGCGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGAGTTTTTAGAGAAGAACAGAGACACGATGTCTTCTGACTGCATTCAATTCCTGTTATCATGTAATTGTGAACTGCTGCCGTTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGTTGCATCAGTTGGAGAGCACCATGCCTCACTTTATTCGCTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGGTCTTGTCCTACATCAGCTTAGGTGTTGTGGTGTTCCAGAAATTGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGACCCATCAAGAGTTTTCCAGAAGGTATGTGTTTATGCTTTCTGAGGCCAACGTATCCCATGATCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGATGCACTGGAGAATATGAGAAAGCAGATTTTGCAGGGAATAGTTGGGATTCAAAAATGTTTCCGTGGTCATCAAGTTCGTGGTTGTTTCTGTGAACTTAAGAATGGAGTGACAACACTACAATCCTTTATTCGTGGAGAAAATTCAAGAAGGAAATATGGTGTCATGTCGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTACTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCTAAACCTAGGAGGAAGTCCTTTATGAAGATAATACCAGAAGTACAGCAGGATTTGTCCAAAGAGCCAGTTCAGAATCTGCTTTCAGCTTTAGCAGAGCTCCAAAGGCAGGTTGACAAGGCTGATGCAGTTGTAGAGCAAAAGGAAGAAGAATATATTGAGTTGAGGGAACAGCTAAAACAATCTGAGAGAAAGAGGATTGAATATGAGACAAAAATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGGATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGTCTTGCTCCTGAGAATGCTACTGTTCAACCTGTAAGACATGATTTTGTGTTACCTCGTGGTTATGATTCTGAAGATACGTCCATGGGATCAAGAACTCCAGGAGGGAGCACACCAATGCTTTCTGGCAATCTGTCTGTCACTGATGCAGGGAGACAGGTCAATGGCACTTTGACTACAGTCAGCAATCTGATGAAGGAATTCGAGCAACGAACACATGACTTTGATGATGAAGTAAAAGCTTTGAACGATGTCAAACCGGGGCAGTGTGCAAACAAAAACTCAGTTGAAGAACTTCGGAAACTTAAACATAGATTTGAAGGGTGGAAGAAACAATACAAGATCAGATTACGTGAGACCAAGGCAAGGCTTTATAAATCAGATCCAGAGAAAAGTTGGCGAGCATGGTGGAAATTAGGCTCCAGGGCATAA 3207 0.3966 MWSLLMWHFLPVIHLGRFGNWMVMIAYLISAKRQPRGQWELGMVQSTSGEEAFVSLSNGNVMKVDRSEILPANPDVLEDVDDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPVLIALNPFKDLQMYGNKYVSACSQRTMNSPHVYATVDAAYNKMMRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGGGNCAIENEFLQINRILEAFGNAKTARNNNSSRFGKLIEIYFGCTGKICGAKIQTLLLEKSRVVQLARDERSYHIFYQLCAGSSSDLKEKLNLRAVSEYKYLVQSDCMSIDGVDDAKNFDQLMEALDAVQIYKEDQELIFKILAAILWLGNISFQVDRDNQIEVVDDEAVNSAAQLMGCSSQDLMTALCTHKIQADEDTIEKKLTLKQAIERRDAIAKFIYASLFNWLLDQVNKSLEAGKKCTWKSISILDFYGFQTFQKNGFEQFYINYANERIQQHYNRHLFKLEQEDYELDGIDWTKVDFEDNQGCLDLFEKKPQGLLSLLDEESNLPNVSDLTFANKLKHHLHPNPCFKGERGRAFRVRHYAGEVLYDTNEFLEKNRDTMSSDCIQFLLSCNCELLPLFSKMFNQSQKQSVATKFKVQLFKLLHQLESTMPHFIRCIAPNTKQLPGIYDEGLVLHQLRCCGVPEIVRLSRAGYPTRMTHQEFSRRYVFMLSEANVSHDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAGQIDALENMRKQILQGIVGIQKCFRGHQVRGCFCELKNGVTTLQSFIRGENSRRKYGVMSKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDATHVNRSKKYPENAKPRRKSFMKIIPEVQQDLSKEPVQNLLSALAELQRQVDKADAVVEQKEEEYIELREQLKQSERKRIEYETKMKSMEEAWQKQMGSLQMSLVAARKSLAPENATVQPVRHDFVLPRGYDSEDTSMGSRTPGGSTPMLSGNLSVTDAGRQVNGTLTTVSNLMKEFEQRTHDFDDEVKALNDVKPGQCANKNSVEELRKLKHRFEGWKKQYKIRLRETKARLYKSDPEKSWRAWWKLGSRA 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00863 1068 FunFam Myosin heavy chain 263 319 - -
Viun11g00863 1068 Gene3D Myosin VI head, motor domain, U50 subdomain 324 603 - -
Viun11g00863 1068 PRINTS Myosin heavy chain signature 162 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 PRINTS Myosin heavy chain signature 108 127 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 PRINTS Myosin heavy chain signature 438 466 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 PRINTS Myosin heavy chain signature 207 234 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 PRINTS Myosin heavy chain signature 491 519 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 SMART MYSc_2a 72 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 Coils Coil 853 908 - -
Viun11g00863 1068 SMART iq_5 796 818 IPR000048 GO:0005515
Viun11g00863 1068 SMART iq_5 759 781 IPR000048 GO:0005515
Viun11g00863 1068 SMART iq_5 736 758 IPR000048 GO:0005515
Viun11g00863 1068 PANTHER MYOSIN 71 1058 - -
Viun11g00863 1068 Pfam Myosin head (motor domain) 80 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 CDD MYSc_Myo8 92 723 IPR036022 -
Viun11g00863 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 817 IPR027417 -
Viun11g00863 1068 Gene3D - 668 736 - -
Viun11g00863 1068 Gene3D - 263 322 - -
Viun11g00863 1068 Gene3D Kinesin motor domain 81 663 IPR036961 -
Viun11g00863 1068 ProSiteProfiles Myosin motor domain profile. 78 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00863 1068 MobiDBLite consensus disorder prediction 944 965 - -
Viun11g00863 1068 Gene3D - 740 788 - -
Viun11g00863 1068 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Viun11g00863 1068 Pfam IQ calmodulin-binding motif 799 815 IPR000048 GO:0005515
Viun11g00863 1068 Pfam IQ calmodulin-binding motif 764 780 IPR000048 GO:0005515
Viun11g00863 1068 ProSiteProfiles IQ motif profile. 797 825 IPR000048 GO:0005515
Viun11g00863 1068 ProSiteProfiles IQ motif profile. 739 766 IPR000048 GO:0005515
Viun11g00863 1068 MobiDBLite consensus disorder prediction 951 965 - -
Viun11g00863 1068 Gene3D - 448 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00863 Viun-Chr11 13342221 13365306 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00863 21 1062 Myosins gene family AT5G54280 58.675 0.0 1242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00863 K10357 - gmx:100802074 1726.45