Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00862 ATGGTGTTATCGGCTTCACCATGTTCCTTGGCGAGAAGCTCGCTGGAGGAGATGCTGGATTCACTTCGGAGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACGCGCCACCGGCGTTGCCTCCGAGGCCGACCTCACGTGCAAGGCTTCCCCCTGCACGGCGGTCGCTGCCGAAAGATTTTATGGTCAGCGGCAGCGAGCGCCGTGTCGTGCTGGAGAACGGAGTTGCTACTGATGAGGAGAGTGAAGTGAAGGAGAGGGATTTGGGGCAGAAGAGGAAAAAGTGTGGTTTTGGGAGCAAGAGGCTGAAGAAGGATGTGGAGTCTCCTTATGTGGCACTTTCTTCCAGTGATTCATCTGGGAAGGTTTGGGAATTGGATGGTGATGATAGCATATCTTATTTCAGCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTAGGAATGGTCCAATCAACTTCAGGAGAGGAAGCATTCGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGACAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAGGATGTGGATGATCTAATTAAACTTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAATTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAGTTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGTATGGAAATAAATATGTCTCAGCCTGTAGCCAGAGAACTATGAATAGTCCTCATGTTTATGCTACGGTAGATGCAGCTTATAACAAGATGATGAGAGATGAAGTAAATCAGTCTATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGTGGTGGTAATTGTGCCATAGAAAATGAATTTCTTCAGATAAATCGTATTTTGGAGGCTTTTGGGAATGCAAAAACAGCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTTACTTTGGCTGCACGGGTAAAATATGTGGGGCTAAAATTCAGACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAACTTGCCCGTGATGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAAACTGAATCTTAGAGCAGTAAGTGAATATAAGTATCTAGTTCAGAGTGACTGCATGTCAATTGATGGTGTTGATGATGCCAAAAACTTTGATCAGCTGATGGAAGCACTGGATGCAGTTCAAATCTATAAAGAGGATCAGGAGCTGATCTTTAAGATACTTGCTGCAATACTCTGGTTGGGAAATATATCATTCCAAGTAGACAGAGACAATCAGATTGAGGTTGTTGACGATGAAGCTGTAAACAGTGCTGCCCAACTCATGGGTTGCAGTTCCCAGGATTTAATGACAGCATTATGTACCCATAAAATCCAAGCTGATGAAGATACTATTGAAAAAAAATTGACATTGAAGCAGGCAATTGAAAGAAGAGATGCTATTGCAAAGTTTATCTATGCAAGCTTGTTTAACTGGCTCTTAGACCAAGTTAACAAGTCACTTGAAGCGGGTAAAAAATGTACATGGAAATCCATAAGTATCCTCGATTTTTATGGGTTTCAGACTTTCCAGAAAAATGGCTTTGAGCAGTTTTACATAAATTATGCCAATGAAAGGATTCAACAACACTATAATCGCCATCTGTTTAAACTAGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCAAACGTTTCTGATTTGACATTTGCGAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCCGCGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGAGTTTTTAGAGAAGAACAGAGACACGATGTCTTCTGACTGCATTCAATTCCTGTTATCATGTAATTGTGAACTGCTGCCGTTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGTTGCATCAGTTGGAGAGCACCATGCCTCACTTTATTCGCTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGGTCTTGTCCTACATCAGCTTAGGTGTTGTGGTGTTCCAGAAATTGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGACCCATCAAGAGTTTTCCAGAAGGTATGTGTTTATGCTTTCTGAGGCCAACGTATCCCATGATCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGATGCACTGGAGAATATGAGAAAGCAGATTTTGCAGGGAATAGTTGGGATTCAAAAATGTTTCCGTGGTCATCAAGTTCGTGGTTGTTTCTGTGAACTTAAGAATGGAGTGACAACACTACAATCCTTTATTCGTGGAGAAAATTCAAGAAGGAAATATGGTGTCATGTCGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTACTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCTAAACCTAGGAGGAAGTCCTTTATGAAGATAATACCAGAAGTACAGCAGGATTTGTCCAAAGAGCCAGTTCAGAATCTGCTTTCAGCTTTAGCAGAGCTCCAAAGGCAGGTTGACAAGGCTGATGCAGTTGTAGAGCAAAAGGAAGAAGAATATATTGAGTTGAGGGAACAGCTAAAACAATCTGAGAGAAAGAGGATTGAATATGAGACAAAAATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGGATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGTCTTGCTCCTGAGAATGCTACTGTTCAACCTGTAAGACATGATTTTGTGTTACCTCGTGGTTATGATTCTGAAGATACGTCCATGGGATCAAGAACTCCAGGAGGGAGCACACCAATGCTTTCTGGCAATCTGTCTGTCACTGATGCAGGGAGACAGGTCAATGGCACTTTGACTACAGTCAGCAATCTGATGAAGGAATTCGAGCAACGAACACATGACTTTGATGATGAAGTAAAAGCTTTGAACGATGTCAAACCGGGGCAGTGTGCAAACAAAAACTCAGTTGAAGAACTTCGGAAACTTAAACATAGATTTGAAGGGTGGAAGAAACAATACAAGATCAGATTACGTGAGACCAAGGCAAGGCTTTATAAATCAGATCCAGAGAAAAGTTGGCGAGCATGGTGGAAATTAGGCTCCAGGGCATAA 3540 0.4133 MVLSASPCSLARSSLEEMLDSLRRRDEEEEKKKDAPPALPPRPTSRARLPPARRSLPKDFMVSGSERRVVLENGVATDEESEVKERDLGQKRKKCGFGSKRLKKDVESPYVALSSSDSSGKVWELDGDDSISYFSKKKLRVWCRQPRGQWELGMVQSTSGEEAFVSLSNGNVMKVDRSEILPANPDVLEDVDDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPVLIALNPFKDLQMYGNKYVSACSQRTMNSPHVYATVDAAYNKMMRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGGGNCAIENEFLQINRILEAFGNAKTARNNNSSRFGKLIEIYFGCTGKICGAKIQTLLLEKSRVVQLARDERSYHIFYQLCAGSSSDLKEKLNLRAVSEYKYLVQSDCMSIDGVDDAKNFDQLMEALDAVQIYKEDQELIFKILAAILWLGNISFQVDRDNQIEVVDDEAVNSAAQLMGCSSQDLMTALCTHKIQADEDTIEKKLTLKQAIERRDAIAKFIYASLFNWLLDQVNKSLEAGKKCTWKSISILDFYGFQTFQKNGFEQFYINYANERIQQHYNRHLFKLEQEDYELDGIDWTKVDFEDNQGCLDLFEKKPQGLLSLLDEESNLPNVSDLTFANKLKHHLHPNPCFKGERGRAFRVRHYAGEVLYDTNEFLEKNRDTMSSDCIQFLLSCNCELLPLFSKMFNQSQKQSVATKFKVQLFKLLHQLESTMPHFIRCIAPNTKQLPGIYDEGLVLHQLRCCGVPEIVRLSRAGYPTRMTHQEFSRRYVFMLSEANVSHDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAGQIDALENMRKQILQGIVGIQKCFRGHQVRGCFCELKNGVTTLQSFIRGENSRRKYGVMSKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDATHVNRSKKYPENAKPRRKSFMKIIPEVQQDLSKEPVQNLLSALAELQRQVDKADAVVEQKEEEYIELREQLKQSERKRIEYETKMKSMEEAWQKQMGSLQMSLVAARKSLAPENATVQPVRHDFVLPRGYDSEDTSMGSRTPGGSTPMLSGNLSVTDAGRQVNGTLTTVSNLMKEFEQRTHDFDDEVKALNDVKPGQCANKNSVEELRKLKHRFEGWKKQYKIRLRETKARLYKSDPEKSWRAWWKLGSRA 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00862 1179 CDD MYSc_Myo8 203 834 IPR036022 -
Viun11g00862 1179 MobiDBLite consensus disorder prediction 19 58 - -
Viun11g00862 1179 Pfam Myosin head (motor domain) 191 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 ProSiteProfiles Myosin motor domain profile. 189 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 Pfam IQ calmodulin-binding motif 910 926 IPR000048 GO:0005515
Viun11g00862 1179 Pfam IQ calmodulin-binding motif 875 891 IPR000048 GO:0005515
Viun11g00862 1179 Gene3D - 851 899 - -
Viun11g00862 1179 Gene3D Kinesin motor domain 192 774 IPR036961 -
Viun11g00862 1179 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 PRINTS Myosin heavy chain signature 602 630 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 PRINTS Myosin heavy chain signature 549 577 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 PRINTS Myosin heavy chain signature 318 345 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 SMART MYSc_2a 183 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 PANTHER MYOSIN 182 1169 - -
Viun11g00862 1179 MobiDBLite consensus disorder prediction 19 37 - -
Viun11g00862 1179 Gene3D - 374 433 - -
Viun11g00862 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 928 IPR027417 -
Viun11g00862 1179 MobiDBLite consensus disorder prediction 1055 1076 - -
Viun11g00862 1179 Coils Coil 12 32 - -
Viun11g00862 1179 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun11g00862 1179 Coils Coil 964 1019 - -
Viun11g00862 1179 ProSiteProfiles IQ motif profile. 850 877 IPR000048 GO:0005515
Viun11g00862 1179 FunFam Myosin heavy chain 374 430 - -
Viun11g00862 1179 ProSiteProfiles IQ motif profile. 871 900 IPR000048 GO:0005515
Viun11g00862 1179 ProSiteProfiles IQ motif profile. 908 936 IPR000048 GO:0005515
Viun11g00862 1179 Gene3D - 779 847 - -
Viun11g00862 1179 Gene3D - 559 736 - -
Viun11g00862 1179 MobiDBLite consensus disorder prediction 1062 1076 - -
Viun11g00862 1179 SMART iq_5 907 929 IPR000048 GO:0005515
Viun11g00862 1179 SMART iq_5 870 892 IPR000048 GO:0005515
Viun11g00862 1179 SMART iq_5 847 869 IPR000048 GO:0005515
Viun11g00862 1179 Gene3D Myosin VI head, motor domain, U50 subdomain 435 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00862 Viun-Chr11 13342221 13366190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00862 1 1173 Myosins gene family AT5G54280 57.400 0.0 1355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00862 K10357 - gmx:100802074 1866.66