Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00861 ATGGTGTTATCGGCTTCACCATGTTCCTTGGCGAGAAGCTCGCTGGAGGAGATGCTGGATTCACTTCGGAGGAGGGACGAGGAGGAGGAGAAGAAGAAGGACGCGCCACCGGCGTTGCCTCCGAGGCCGACCTCACGTGCAAGGCTTCCCCCTGCACGGCGGTCGCTGCCGAAAGATTTTATGGTCAGCGGCAGCGAGCGCCGTGTCGTGCTGGAGAACGGAGTTGCTACTGATGAGGAGAGTGAAGTGAAGGAGAGGGATTTGGGGCAGAAGAGGAAAAAGTGTGGTTTTGGGAGCAAGAGGCTGAAGAAGGATGTGGAGTCTCCTTATGTGGCACTTTCTTCCAGTGATTCATCTGGGAAGGTTTGGGAATTGGATGGTGATGATAGCATATCTTATTTCAGCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTAGGAATGGTCCAATCAACTTCAGGAGAGGAAGCATTCGTTTCACTCTCAAATGGAAATGTTATGAAAGTGGACAGATCAGAGATTCTACCAGCAAATCCTGATGTTTTGGAGGATGTGGATGATCTAATTAAACTTGGTTATTTGAATGAGCCATCGGTTCTTCACAATCTTAAATTAAGATATTCTCAAGGGATGATTTATAGTAAAGCAGGGCCAGTTTTAATTGCACTCAATCCTTTCAAAGATCTTCAGATGTATGGAAATAAATATGTCTCAGCCTGTAGCCAGAGAACTATGAATAGTCCTCATGTTTATGCTACGGTAGATGCAGCTTATAACAAGATGATGAGAGATGAAGTAAATCAGTCTATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCAATGCAATACTTAGCTGCTCTTGGTGGTGGTGGTGGTAATTGTGCCATAGAAAATGAATTTCTTCAGATAAATCGTATTTTGGAGGCTTTTGGGAATGCAAAAACAGCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTTACTTTGGCTGCACGGGTAAAATATGTGGGGCTAAAATTCAGACCTTATTGTTGGAAAAGTCCAGAGTTGTTCAACTTGCCCGTGATGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAGAAACTGAATCTTAGAGCAGTAAGTGAATATAAGTATCTAGTTCAGAGTGACTGCATGTCAATTGATGGTGTTGATGATGCCAAAAACTTTGATCAGCTGATGGAAGCACTGGATGCAGTTCAAATCTATAAAGAGGATCAGGAGCTGATCTTTAAGATACTTGCTGCAATACTCTGGTTGGGAAATATATCATTCCAAGTAGACAGAGACAATCAGATTGAGGTTGTTGACGATGAAGCTGTAAACAGTGCTGCCCAACTCATGGGTTGCAGTTCCCAGGATTTAATGACAGCATTATGTACCCATAAAATCCAAGCTGATGAAGATACTATTGAAAAAAAATTGACATTGAAGCAGGCAATTGAAAGAAGAGATGCTATTGCAAAGTTTATCTATGCAAGCTTGTTTAACTGGCTCTTAGACCAAGTTAACAAGTCACTTGAAGCGGGTAAAAAATGTACATGGAAATCCATAAGTATCCTCGATTTTTATGGGTTTCAGACTTTCCAGAAAAATGGCTTTGAGCAGTTTTACATAAATTATGCCAATGAAAGGATTCAACAACACTATAATCGCCATCTGTTTAAACTAGAGCAGGAGGACTATGAATTGGATGGCATTGATTGGACTAAAGTAGATTTTGAGGACAATCAAGGGTGCTTGGATCTATTTGAGAAGAAACCTCAAGGTCTACTCTCTTTGTTGGATGAGGAGTCAAATTTACCAAACGTTTCTGATTTGACATTTGCGAACAAACTTAAGCATCACTTGCACCCTAATCCTTGCTTCAAAGGGGAAAGAGGCAGAGCTTTCCGCGTTCGTCACTATGCAGGAGAGGTTCTGTATGATACAAATGAGTTTTTAGAGAAGAACAGAGACACGATGTCTTCTGACTGCATTCAATTCCTGTTATCATGTAATTGTGAACTGCTGCCGTTGTTCTCCAAAATGTTTAACCAGTCTCAAAAGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCAAGTTGTTGCATCAGTTGGAGAGCACCATGCCTCACTTTATTCGCTGCATAGCACCAAATACTAAGCAGCTTCCTGGCATTTATGATGAAGGTCTTGTCCTACATCAGCTTAGGTGTTGTGGTGTTCCAGAAATTGTTAGACTTTCAAGGGCTGGATATCCTACTCGAATGACCCATCAAGAGTTTTCCAGAAGGTATGTGTTTATGCTTTCTGAGGCCAACGTATCCCATGATCCATTGAGCATCTCAGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGATGCACTGGAGAATATGAGAAAGCAGATTTTGCAGGGAATAGTTGGGATTCAAAAATGTTTCCGTGGTCATCAAGTTCGTGGTTGTTTCTGTGAACTTAAGAATGGAGTGACAACACTACAATCCTTTATTCGTGGAGAAAATTCAAGAAGGAAATATGGTGTCATGTCGAAGTCTTCAATAACAATTTATTCTAGAAAACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGATGCTACTCATGTAAATAGGTCAAAGAAATATCCTGAAAATGCTAAACCTAGGAGGAAGTCCTTTATGAAGATAATACCAGAAGTACAGGATTTGTCCAAAGAGCCAGTTCAGAATCTGCTTTCAGCTTTAGCAGAGCTCCAAAGGCAGGTTGACAAGGCTGATGCAGTTGTAGAGCAAAAGGAAGAAGAATATATTGAGTTGAGGGAACAGCTAAAACAATCTGAGAGAAAGAGGATTGAATATGAGACAAAAATGAAGTCAATGGAGGAGGCTTGGCAAAAGCAGATGGGATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGTCTTGCTCCTGAGAATGCTACTGTTCAACCTGTAAGACATGATTTTGTGTTACCTCGTGGTTATGATTCTGAAGATACGTCCATGGGATCAAGAACTCCAGGAGGGAGCACACCAATGCTTTCTGGCAATCTGTCTGTCACTGATGCAGGGAGACAGGTCAATGGCACTTTGACTACAGTCAGCAATCTGATGAAGGAATTCGAGCAACGAACACATGACTTTGATGATGAAGTAAAAGCTTTGAACGATGTCAAACCGGGGCAGTGTGCAAACAAAAACTCAGTTGAAGAACTTCGGAAACTTAAACATAGATTTGAAGGGTGGAAGAAACAATACAAGATCAGATTACGTGAGACCAAGGCAAGGCTTTATAAATCAGATCCAGAGAAAAGTTGGCGAGCATGGTGGAAATTAGGCTCCAGGGCATAA 3537 0.4131 MVLSASPCSLARSSLEEMLDSLRRRDEEEEKKKDAPPALPPRPTSRARLPPARRSLPKDFMVSGSERRVVLENGVATDEESEVKERDLGQKRKKCGFGSKRLKKDVESPYVALSSSDSSGKVWELDGDDSISYFSKKKLRVWCRQPRGQWELGMVQSTSGEEAFVSLSNGNVMKVDRSEILPANPDVLEDVDDLIKLGYLNEPSVLHNLKLRYSQGMIYSKAGPVLIALNPFKDLQMYGNKYVSACSQRTMNSPHVYATVDAAYNKMMRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGGGNCAIENEFLQINRILEAFGNAKTARNNNSSRFGKLIEIYFGCTGKICGAKIQTLLLEKSRVVQLARDERSYHIFYQLCAGSSSDLKEKLNLRAVSEYKYLVQSDCMSIDGVDDAKNFDQLMEALDAVQIYKEDQELIFKILAAILWLGNISFQVDRDNQIEVVDDEAVNSAAQLMGCSSQDLMTALCTHKIQADEDTIEKKLTLKQAIERRDAIAKFIYASLFNWLLDQVNKSLEAGKKCTWKSISILDFYGFQTFQKNGFEQFYINYANERIQQHYNRHLFKLEQEDYELDGIDWTKVDFEDNQGCLDLFEKKPQGLLSLLDEESNLPNVSDLTFANKLKHHLHPNPCFKGERGRAFRVRHYAGEVLYDTNEFLEKNRDTMSSDCIQFLLSCNCELLPLFSKMFNQSQKQSVATKFKVQLFKLLHQLESTMPHFIRCIAPNTKQLPGIYDEGLVLHQLRCCGVPEIVRLSRAGYPTRMTHQEFSRRYVFMLSEANVSHDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAGQIDALENMRKQILQGIVGIQKCFRGHQVRGCFCELKNGVTTLQSFIRGENSRRKYGVMSKSSITIYSRKLEEIHAIILLQSVIRGWLVRRDATHVNRSKKYPENAKPRRKSFMKIIPEVQDLSKEPVQNLLSALAELQRQVDKADAVVEQKEEEYIELREQLKQSERKRIEYETKMKSMEEAWQKQMGSLQMSLVAARKSLAPENATVQPVRHDFVLPRGYDSEDTSMGSRTPGGSTPMLSGNLSVTDAGRQVNGTLTTVSNLMKEFEQRTHDFDDEVKALNDVKPGQCANKNSVEELRKLKHRFEGWKKQYKIRLRETKARLYKSDPEKSWRAWWKLGSRA 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00861 1178 CDD MYSc_Myo8 203 834 IPR036022 -
Viun11g00861 1178 Coils Coil 963 1018 - -
Viun11g00861 1178 Gene3D Myosin VI head, motor domain, U50 subdomain 435 714 - -
Viun11g00861 1178 PANTHER MYOSIN 182 1168 - -
Viun11g00861 1178 MobiDBLite consensus disorder prediction 19 58 - -
Viun11g00861 1178 Gene3D - 559 736 - -
Viun11g00861 1178 MobiDBLite consensus disorder prediction 1061 1075 - -
Viun11g00861 1178 Pfam Myosin head (motor domain) 191 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 ProSiteProfiles Myosin motor domain profile. 189 846 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 Pfam IQ calmodulin-binding motif 910 926 IPR000048 GO:0005515
Viun11g00861 1178 Pfam IQ calmodulin-binding motif 875 891 IPR000048 GO:0005515
Viun11g00861 1178 Gene3D - 851 899 - -
Viun11g00861 1178 PRINTS Myosin heavy chain signature 273 298 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 PRINTS Myosin heavy chain signature 602 630 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 PRINTS Myosin heavy chain signature 549 577 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 PRINTS Myosin heavy chain signature 219 238 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 PRINTS Myosin heavy chain signature 318 345 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 SMART MYSc_2a 183 847 IPR001609 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 MobiDBLite consensus disorder prediction 19 37 - -
Viun11g00861 1178 Gene3D Kinesin motor domain 192 774 IPR036961 -
Viun11g00861 1178 MobiDBLite consensus disorder prediction 1054 1075 - -
Viun11g00861 1178 Gene3D - 779 847 - -
Viun11g00861 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 928 IPR027417 -
Viun11g00861 1178 Coils Coil 12 32 - -
Viun11g00861 1178 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 136 185 IPR004009 GO:0003774|GO:0005524|GO:0016459
Viun11g00861 1178 ProSiteProfiles IQ motif profile. 850 877 IPR000048 GO:0005515
Viun11g00861 1178 FunFam Myosin heavy chain 374 430 - -
Viun11g00861 1178 ProSiteProfiles IQ motif profile. 871 900 IPR000048 GO:0005515
Viun11g00861 1178 Gene3D - 374 433 - -
Viun11g00861 1178 ProSiteProfiles IQ motif profile. 908 936 IPR000048 GO:0005515
Viun11g00861 1178 SMART iq_5 907 929 IPR000048 GO:0005515
Viun11g00861 1178 SMART iq_5 870 892 IPR000048 GO:0005515
Viun11g00861 1178 SMART iq_5 847 869 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00861 Viun-Chr11 13342221 13366190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00861 1 1172 Myosins gene family AT5G54280 57.330 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00861 K10357 - gmx:100802074 1862.43