Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00857 ATGGCTGACATAGCGGGTCTGGCTGAGGCTGCAGGGGCAAGATTTAGCTCATTGGAGCTTATTGGGCAGGGGTCATTCGGCGACGTGTATAAAGGGTTTGACAAGGAGCTAAACAAGGAAGTTGCTATCAAAATGATTGATTTGGAAGAATCAGAGGATGAAATAGAGGACATTCAGAAGGAAATTTCTGTACTGTCACAATGTAGATCAGCGTACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTGCAATCAGGTCCCCCACTTGATGAAATGTCAATTGCTTGCATTCTACGTGATTTACTTCATGCAATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTAACTGAGAATGGTGATGTAAAGGTTGCTGATTTTGGAGTTTCTGCACAGTTAACAAGAACCATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAATTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCTTTGGGGATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCACTTGCAGATCTTCATCCAATGAGAGTGCTTTTTATCATACCACGAGAGAATCCACCACAACTAGATGAACACTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGTTCCTGCTGAGAGACCAAGTGCTAAAGAGCTTCTTAGACATCGTTTCATTCGGAACGCCAGGAAGAGTCCTAAGCTATTGGAGAGAATAAGGGAGCGTCCAAAGTTTCAAATAAAGGAAGATGAGGCAACACCCAGAAATGCCCCAAAGGGGGTGGGCGAGGCATATGATACTGTTAAGGTTGCGAAAGATTTAAGGGTTGATGAGACTAATCAGCCTAGTGGCCAAGGTAAAACCCTGAAAAGTTCTGGGTGGGACTTCAGCATTAGTGGATCTCAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAATTTAGAGACAAGAAAACTGAAGTTTCAAATCATCAGCTTACCCAAAAAAAAAGTCCAGAGAGTGGCTATCAGGGGGGATCTGGCAATAAAAGTGAGTTGCTAGAGGCTTCTTTTGGAAAAGATTCAGGAGTTCCCTACCATGATGAACATCTGGATAATCATCTTGAAGATCAGGATGAATTGTTTGGGAATGGATTAGGAACTGTTGTTGTTCGGTCTCCAAAAGGACCACAGTCATCACTGTTTCGTGACCAAAGTTCCCGCTCTAGCAGCAGCTATGCTTCTTTTGAAGACGTTTCTACAAGCGGAACTGTTGTTTTGCGTAATCAGCACGATGATTCTGATTCTCCACAGACACCAAGGTCCCGACTTGGACTTAATAGCAGAAATTCAAATGCCTCATTTGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGTGGATTGAAGAAAATGAATGTCCGGGATAGATTTGCACTGGGAAAACTCAACAATGATGTACAAGAAAGCAGGAGAGATCAAATGTCAACCAGCTCTGATTCTTCCAGACCATCTCGTGAATACATTGATGCACAAAAGGGGATTTCAAGATCACAGAATGATATTGATGATGAAGAAAGTGCCAAAATAATCTCATCATCTGCGCCGTTATCTGTTTTGCTTATTCCATCATTAAAAGAGGCCATTGCTGAGGATCCAGAAGGGCCAATTGTGCAAATTGTTATCAATGCTCTTTTGAACATGGAGAAGACAAAGCCCCAATCCTGTGATGCTCTTGTCAAAAACTTGCTTCAACGGTTGGCAAGTTCAAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGCCGATTACTCAGCAAGACTAAGTCAGCTGAAGAAGCCCGAAATGCAGAGACAGATCTCAAGAAGAAACAGAACAAGGAAGTTCATTCAAATAGCAATTTGAGTCCCCTCGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAGCTTCACGGGATCTAAATTCATCTTGA 2097 0.4196 MADIAGLAEAAGARFSSLELIGQGSFGDVYKGFDKELNKEVAIKMIDLEESEDEIEDIQKEISVLSQCRSAYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKFQIKEDEATPRNAPKGVGEAYDTVKVAKDLRVDETNQPSGQGKTLKSSGWDFSISGSQGTGTFRSVSRPPQFRDKKTEVSNHQLTQKKSPESGYQGGSGNKSELLEASFGKDSGVPYHDEHLDNHLEDQDELFGNGLGTVVVRSPKGPQSSLFRDQSSRSSSSYASFEDVSTSGTVVLRNQHDDSDSPQTPRSRLGLNSRNSNASFEDSATNLAEAKAAIQGGLKKMNVRDRFALGKLNNDVQESRRDQMSTSSDSSRPSREYIDAQKGISRSQNDIDDEESAKIISSSAPLSVLLIPSLKEAIAEDPEGPIVQIVINALLNMEKTKPQSCDALVKNLLQRLASSKELSLKDLQELAGRLLSKTKSAEEARNAETDLKKKQNKEVHSNSNLSPLARFLLSRWQGQASRDLNSS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00857 698 MobiDBLite consensus disorder prediction 423 493 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 523 567 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 315 389 - -
Viun11g00857 698 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Viun11g00857 698 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00857 698 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00857 698 Coils Coil 635 668 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 649 670 - -
Viun11g00857 698 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Viun11g00857 698 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00857 698 MobiDBLite consensus disorder prediction 429 493 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 530 545 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 368 387 - -
Viun11g00857 698 Coils Coil 41 68 - -
Viun11g00857 698 Gene3D Transferase(Phosphotransferase) domain 1 12 300 - -
Viun11g00857 698 CDD STKc_MST3_like 14 287 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 319 352 - -
Viun11g00857 698 MobiDBLite consensus disorder prediction 649 674 - -
Viun11g00857 698 SUPERFAMILY Protein kinase-like (PK-like) 14 296 IPR011009 -
Viun11g00857 698 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00857 Viun-Chr11 13259654 13283358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00857 1 695 MAP Kinase Kinase Kinase Kinase AT3G15220 64.387 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Viun11g00857 Pkinase 6.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00857 K08838 - gmx:100786501 1185.63