Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00825 ATGGATAGTGGCTACTACAATCACCACCACCTCCCTCACCTCGACAACACCAACGAACCACATTTACCTCCTGGCTTCAGGTTCCACCCCACAGACGAGGAACTCATCACATACTACCTCCTCAAGAAGGTTCTAGACAGTTCCTTCACTGGCCGAGCCATAGTTGAAGTCGACCTCAACAAGTGCGAACCATGGGAGCTTCCTGAGAAAGCGAAGATGGGTGAGAAGGAATGGTACTTTTATAGCCTTCGTGACCGGAAGTACCCAACTGGGTTACGCACCAACAGGGCCACGGAGGCTGGTTATTGGAAAGCCACCGGAAAAGACAGAGAGATCTATAGCTCCAAAACCTGTTCCCTCGTTGGGATGAAGAAAACCCTGGTTTTCTATAGAGGAAGAGCTCCAAAGGGTGAAAAGAGTAACTGGGTCATGCATGAGTATCGTTTAGAAGGCAAATTCGCTTATCACTACCTCTCCAGAAGCTCCAAGGATGAGTGGGTGATATCGCGTGTGTTTCAGAAGAACAACACCGGCGGTGCCTCCACTGTGTCAGCCGCCGCAGCCACCGGCAGTTCGAAGAAAACAAGAATGAGCACATCGAACGCAAGCAGCAACATGAGCCTCTGCCCCGAACCGGGTTCACCCTCTTCCATTTACCTCCCGCCGCTTCTAGAATCTTCTCCTTACGCCGCCAGCGGCAGCGCCGCCGCAACGTTCAACGACCGCGAAAACTACTCCTTCGAAAGTGCCGCCGCCACCGCCGCCAACCAAAGGGAGCACGTGTCCTGTTTCTCCACCATGTCCGCCGACGCTGCCGCCTTCAACCACCTCGCTCTGCCGCCGGAACCGCCGCTCGACCCTTTCTCCCGGTTTCACAGGAACAACATTGGAGTATCCGCCTTCCCATGTCTGAGGTCCTTGCACGAGAACCTTAACCTCCCCTTCTTTTTCCCTCCCGTGGTCCACGGCGGTTCTGACGTAGGAAATTTTACCGCCGTGGCAAACTTGCCGGCGCCGGAGGATCCGAGGGTGGCTGACGGCAGTTCTGGCATGCCGGTTGTACCGTCCGAATTGGACTGCATGTGGGGCTATTGA 1095 0.5498 MDSGYYNHHHLPHLDNTNEPHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIVEVDLNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQKNNTGGASTVSAAAATGSSKKTRMSTSNASSNMSLCPEPGSPSSIYLPPLLESSPYAASGSAAATFNDRENYSFESAAATAANQREHVSCFSTMSADAAAFNHLALPPEPPLDPFSRFHRNNIGVSAFPCLRSLHENLNLPFFFPPVVHGGSDVGNFTAVANLPAPEDPRVADGSSGMPVVPSELDCMWGY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00825 364 Gene3D NAC domain 31 178 IPR036093 GO:0003677|GO:0006355
Viun11g00825 364 FunFam NAC domain-containing protein 100-like 31 178 - -
Viun11g00825 364 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 21 240 - -
Viun11g00825 364 SUPERFAMILY NAC domain 15 174 IPR036093 GO:0003677|GO:0006355
Viun11g00825 364 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Viun11g00825 364 MobiDBLite consensus disorder prediction 182 209 - -
Viun11g00825 364 ProSiteProfiles NAC domain profile. 22 174 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00825 Viun-Chr11 12643122 12645544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00825 1 364 NAC Transcription Factor Family AT5G53950 50.378 3.70e-118 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun11g00825 NAM 3.8e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00825 - - gmx:100788671 600.127