Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00803 ATGAATGCAGAGCTAGGTTTGATCAATTGGAGCAAGAGTATTACTATGATGACTACTTTCTTTAATCTTTTCAGAAAGAAAGGATCTTCCTTGTACACTCAGTTGACCGAAATTGATTTAGGTGCAGACCACAGTACCATCCAATTTAGTTGGCCAACAAGAAGAAACATTTGTGTAGGTGTTGCAAGGGGTCTTGCGTTCCTTCATGAAGAGGTTCGGTCCCACTTTATCTATAGAAAGATACAAGCAACCAAAGTACTACTTGACGAAGATCTCCGGCCAAAAAGTTCACATTTTGGGCTTGCAAAGCTTATCCCACCCAGTGTATATTTTCCTTTTGAAGGTGGTTATGTGGCACCAGAACATGGAGTCCGAAATAAAGTGACAATAAAATCAGCTTTGGAGCTCTATTATTAG 417 0.3981 MNAELGLINWSKSITMMTTFFNLFRKKGSSLYTQLTEIDLGADHSTIQFSWPTRRNICVGVARGLAFLHEEVRSHFIYRKIQATKVLLDEDLRPKSSHFGLAKLIPPSVYFPFEGGYVAPEHGVRNKVTIKSALELYY 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00803 138 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 44 132 - -
Viun11g00803 138 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00803 138 Pfam Protein tyrosine and serine/threonine kinase 45 105 IPR001245 GO:0004672|GO:0006468
Viun11g00803 138 SUPERFAMILY Protein kinase-like (PK-like) 30 132 IPR011009 -
Viun11g00803 138 Gene3D Transferase(Phosphotransferase) domain 1 29 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00803 Viun-Chr11 11484227 11495657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00803 41 132 Receptor kinase-like Gene Family AT1G53420 48.485 3.26e-24 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00803 PK_Tyr_Ser-Thr 9.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00803 - - vun:114170681 282.337