Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g00781 ATGTCAATTAAAGCGTCCCACATCTCAGTCTTTATTCCTCTTGGACCAGCCATTGATGATAAAGTTCCTAGCAATGTTCCATTGACAAACAGTGGTGGCTTTGGAACTGGTTGGTCCGTTGTTCCTGGACACGAGAATGTTCCCAAGTGGTGTTGTTCCTATCAATTTGATTCTGAGAAGAACAGATTTGAAGTGGATGACTTAGGATTGCCAATTATACTAAGTTTACCCTTTGAATCCAACCCCATTTGGCCTATGCCCAATTTGCCACAGAGAACACCACAATATCAACATCAATCTTCTTCATCAGTGTGTTGTTTAAATCCCTTCTGTCTTCTTGAGTTGACAGATGATGAGAAAAGAAAACAACTTGATTGGAAAGTAAGATTAAACATTATCAATGGAATAGCAAGAGGTCTTCTATACCTTCCTGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAGTGTTCTATTAGACCATGCCATGAATCCCAAAATATCAGACTTTGGATTGGCAAAGGCATTTGAAATTGGACAGAACCAAGCAAATACAAAGCGAATAATGGGCACCTAG 588 0.398 MSIKASHISVFIPLGPAIDDKVPSNVPLTNSGGFGTGWSVVPGHENVPKWCCSYQFDSEKNRFEVDDLGLPIILSLPFESNPIWPMPNLPQRTPQYQHQSSSSVCCLNPFCLLELTDDEKRKQLDWKVRLNIINGIARGLLYLPEDSRLRVIHRDLKASSVLLDHAMNPKISDFGLAKAFEIGQNQANTKRIMGT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g00781 195 Pfam Protein tyrosine and serine/threonine kinase 116 185 IPR001245 GO:0004672|GO:0006468
Viun11g00781 195 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun11g00781 195 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 108 195 - -
Viun11g00781 195 FunFam Os07g0541700 protein 111 195 - -
Viun11g00781 195 Gene3D Transferase(Phosphotransferase) domain 1 111 195 - -
Viun11g00781 195 SUPERFAMILY Protein kinase-like (PK-like) 110 195 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g00781 Viun-Chr11 11076083 11076913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g00781 115 195 Receptor kinase-like Gene Family AT4G05200 66.667 5.60e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun11g00781 PK_Tyr_Ser-Thr 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g00781 - - vun:114170171 406.757